RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Gli2Q0VGT2 1544 aa14.04□□□□□ -0.16
Herc4-201ENSMUST00000020258 KdrP35918 1367 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Tmc1Q8R4P5 757 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Znf521Q6KAS7 1311 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Ttc21aQ8C0S4 1314 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Fkbp4P30416 458 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Gm156Q58A37 223 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Filip1lQ6P6L0 1131 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 AampJ3QN89 436 aa14.03□□□□□ -0.16
Herc4-201ENSMUST00000020258 Cfdp1O88271 295 aaKnown RBP14.02□□□□□ -0.16
Herc4-201ENSMUST00000020258 Rbm27Q5SFM8 1060 aaKnown RBP14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Ccne1Q61457 408 aa14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Gdpd2Q9ESM6 539 aa14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Ap3b2Q9JME5 1082 aa14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Zcchc11B2RX14 1644 aaKnown RBP14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Samd1D3YXK1 519 aa14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Rrp12Q6P5B0 1295 aaKnown RBP14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Idi2Q8BFZ6 227 aa14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Map3k19E9Q3S4 1311 aa14.02□□□□□ -0.17
Herc4-201ENSMUST00000020258 Syce3B5KM66 88 aa14.01□□□□□ -0.17
Herc4-201ENSMUST00000020258 Rsph6aQ8CDR2 708 aa14.01□□□□□ -0.17
Herc4-201ENSMUST00000020258 Eif4a2P10630 407 aa14.01□□□□□ -0.17
Herc4-201ENSMUST00000020258 Polr3gQ6NXY9 223 aa14.01□□□□□ -0.17
Herc4-201ENSMUST00000020258 Bag4Q8CI61 457 aa14.01□□□□□ -0.17
Herc4-201ENSMUST00000020258 Setd1aE9PYH6 1716 aa14.01□□□□□ -0.17
Herc4-201ENSMUST00000020258 1700010I14RikQ7TPG0 532 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 Prune1Q8BIW1 454 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 Gprasp1Q5U4C1 1347 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 Phf14Q9D4H9 881 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 AnkarA2RT91 1465 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 Exoc6bA6H5Z3 810 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 FosbP13346 338 aa14□□□□□ -0.17
Herc4-201ENSMUST00000020258 Zkscan1Q8BGS3 561 aaKnown RBP14□□□□□ -0.17
Herc4-201ENSMUST00000020258 Gm10093D3YYI8 482 aa13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Hdac1O09106 482 aaKnown RBP13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Tmem132eQ6IEE6 982 aa13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Ppp1r42Q8R1Z4 357 aa13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Kif2cQ922S8 721 aa13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Nphp1Q9QY53 687 aa13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 CrebrfQ8CDG5 640 aaKnown RBP13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 ShprhQ7TPQ3 1674 aa13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Znf518aB2RRF6 1478 aaKnown RBP13.99□□□□□ -0.17
Herc4-201ENSMUST00000020258 Rnf17Q99MV7 1640 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Gadd45bP22339 160 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Pdia3P27773 505 aaKnown RBP13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 F2rP30558 430 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Usp48Q3V0C5 1052 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Erc2Q6PH08 957 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Rassf8Q8CJ96 419 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Antxr1Q9CZ52 562 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 PtprtQ99M80 1454 aa13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Gnai2P08752 355 aaKnown RBP13.98□□□□□ -0.17
Herc4-201ENSMUST00000020258 Wwc1Q5SXA9 1104 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Abcc3B2RX12 1523 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Zbtb45Q52KG4 520 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Jarid2Q62315 1234 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Ptpdc1Q6NZK8 747 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Gcc1Q9D4H2 778 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 MecomP14404 1042 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Mphosph10Q810V0 681 aaKnown RBP13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Abca6Q8K441 1624 aa13.97□□□□□ -0.17
Herc4-201ENSMUST00000020258 Dennd6aQ8BH65 605 aa13.96□□□□□ -0.17
Herc4-201ENSMUST00000020258 Mad1l1Q9WTX8 717 aaKnown RBP13.96□□□□□ -0.17
Herc4-201ENSMUST00000020258 St18Q80TY4 1045 aa13.96□□□□□ -0.17
Herc4-201ENSMUST00000020258 NexnQ7TPW1 607 aa13.96□□□□□ -0.18
Herc4-201ENSMUST00000020258 Zbtb22Q9Z0G7 638 aa13.96□□□□□ -0.18
Herc4-201ENSMUST00000020258 Uhrf1bp1lA2RSJ4 1457 aa13.96□□□□□ -0.18
Herc4-201ENSMUST00000020258 Skint5A7XUY5 1461 aa13.96□□□□□ -0.18
Herc4-201ENSMUST00000020258 LifrP42703 1092 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 Tceal9Q9DD24 104 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 Pof1bQ8K4L4 587 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 Sh3bp5Q9Z131 463 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 Myom2Q14BI5 1463 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 4933402E13RikQ9D4D2 429 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 Nos1Q9Z0J4 1429 aa13.95□□□□□ -0.18
Herc4-201ENSMUST00000020258 Zkscan2G3X952 960 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 VgfQ0VGU4 617 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Hs1bp3Q3TC93 395 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Gripap1Q8VD04 806 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Yeats2Q3TUF7 1407 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Ppfia3P60469 1194 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Q3UJC8 639 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Chpf2Q3UU43 768 aa13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Utp3Q9JI13 469 aaKnown RBP13.94□□□□□ -0.18
Herc4-201ENSMUST00000020258 Ddrgk1Q80WW9 315 aa13.93□□□□□ -0.18
Herc4-201ENSMUST00000020258 Nckap5lQ6GQX2 1323 aa13.93□□□□□ -0.18
Herc4-201ENSMUST00000020258 PaskQ8CEE6 1383 aa13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 Pdia4P08003 638 aaKnown RBP13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 EvcP57680 1005 aa13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 EappQ5BU09 281 aa13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 Gtf2a1Q99PM3 378 aa13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 Nucb1Q02819 459 aaKnown RBP13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 Tceanc2Q8R2M0 207 aa13.92□□□□□ -0.18
Herc4-201ENSMUST00000020258 Ppp6r3Q922D4 844 aa13.91□□□□□ -0.18
Herc4-201ENSMUST00000020258 Atg4a-psA0A0G2JFS9 396 aa13.91□□□□□ -0.18
Herc4-201ENSMUST00000020258 Neurod6P48986 337 aa13.91□□□□□ -0.18
Herc4-201ENSMUST00000020258 Atg4aQ8C9S8 396 aa13.91□□□□□ -0.18
Herc4-201ENSMUST00000020258 Iffo2Q8R2V2 512 aa13.91□□□□□ -0.18
Herc4-201ENSMUST00000020258 CatipB9EKE5 520 aa13.9□□□□□ -0.18
Herc4-201ENSMUST00000020258 Kif4P33174 1231 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms