RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Rapgef6Q5NCJ1 1609 aa15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Nsfl1cQ9CZ44 370 aaKnown RBP15.23■□□□□ 0.03
Msh6-201ENSMUST00000005503 Q9D9S1 216 aa15.23■□□□□ 0.03
Msh6-201ENSMUST00000005503 Dennd4bQ3U1Y4 1499 aa15.23■□□□□ 0.03
Msh6-201ENSMUST00000005503 ImpactO55091 318 aa15.23■□□□□ 0.03
Msh6-201ENSMUST00000005503 Fkbp4P30416 458 aa15.23■□□□□ 0.03
Msh6-201ENSMUST00000005503 Afap1Q80YS6 731 aa15.22■□□□□ 0.03
Msh6-201ENSMUST00000005503 Slc52a2Q9D8F3 450 aa15.22■□□□□ 0.03
Msh6-201ENSMUST00000005503 AlkP97793 1621 aa15.22■□□□□ 0.03
Msh6-201ENSMUST00000005503 Trim27Q62158 513 aa15.22■□□□□ 0.03
Msh6-201ENSMUST00000005503 IbtkQ6ZPR6 1352 aaKnown RBP15.21■□□□□ 0.03
Msh6-201ENSMUST00000005503 BccipQ9CWI3 316 aa15.21■□□□□ 0.03
Msh6-201ENSMUST00000005503 Rnf20Q5DTM8 973 aa15.21■□□□□ 0.03
Msh6-201ENSMUST00000005503 EvcP57680 1005 aa15.2■□□□□ 0.02
Msh6-201ENSMUST00000005503 Mapkbp1Q6NS57 1503 aa15.2■□□□□ 0.02
Msh6-201ENSMUST00000005503 Gadd45bP22339 160 aa15.2■□□□□ 0.02
Msh6-201ENSMUST00000005503 Drc7Q6V3W6 876 aa15.2■□□□□ 0.02
Msh6-201ENSMUST00000005503 Ppp1r42Q8R1Z4 357 aa15.2■□□□□ 0.02
Msh6-201ENSMUST00000005503 Shroom2A2ALU4 1481 aa15.2■□□□□ 0.02
Msh6-201ENSMUST00000005503 Cbx1P83917 185 aaKnown RBP15.19■□□□□ 0.02
Msh6-201ENSMUST00000005503 NcapgE9PWG6 1004 aa15.19■□□□□ 0.02
Msh6-201ENSMUST00000005503 Cchcr1Q8K2I2 770 aa15.19■□□□□ 0.02
Msh6-201ENSMUST00000005503 Nol10Q5RJG1 687 aaKnown RBP15.19■□□□□ 0.02
Msh6-201ENSMUST00000005503 Hook1Q8BIL5 728 aa15.19■□□□□ 0.02
Msh6-201ENSMUST00000005503 Q8C5K5 320 aa15.19■□□□□ 0.02
Msh6-201ENSMUST00000005503 Exoc6bA6H5Z3 810 aa15.18■□□□□ 0.02
Msh6-201ENSMUST00000005503 Dmrtc1Q9D9R7 182 aa15.18■□□□□ 0.02
Msh6-201ENSMUST00000005503 AI481877A2ALV5 1481 aa15.18■□□□□ 0.02
Msh6-201ENSMUST00000005503 Fam13aQ8BGI4 693 aa15.18■□□□□ 0.02
Msh6-201ENSMUST00000005503 Serpina10Q8R121 448 aa15.18■□□□□ 0.02
Msh6-201ENSMUST00000005503 Gdpd2Q9ESM6 539 aa15.18■□□□□ 0.02
Msh6-201ENSMUST00000005503 PdcQ9QW08 244 aa15.17■□□□□ 0.02
Msh6-201ENSMUST00000005503 Dnajc5bQ9CQ94 199 aa15.17■□□□□ 0.02
Msh6-201ENSMUST00000005503 Tex14Q7M6U3 1450 aa15.17■□□□□ 0.02
Msh6-201ENSMUST00000005503 Hmgn5Q9JL35 406 aa15.17■□□□□ 0.02
Msh6-201ENSMUST00000005503 Mctp1E9PV86 951 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 Wdr78E9PYY5 807 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 Anapc15-psA0A140T8L6 141 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 Lrrc9Q8CDN9 1456 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 Cavin1O54724 392 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 Pdia3P27773 505 aaKnown RBP15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 Top1mtQ8R4U6 593 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 TnmdQ9EP64 317 aa15.16■□□□□ 0.02
Msh6-201ENSMUST00000005503 PtprgQ05909 1442 aa15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 Vamp4O70480 141 aa15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 Gjb2Q00977 226 aa15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 NaspQ99MD9 773 aaKnown RBP15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 Sbno1Q689Z5 1390 aa15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 Gm16486A0A1D5RMD1 1434 aa15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 HnrnpmQ9D0E1 729 aaKnown RBP15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 Ppp1r15aP17564 657 aa15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 Nol8Q3UHX0 1147 aaKnown RBP15.15■□□□□ 0.02
Msh6-201ENSMUST00000005503 LifrP42703 1092 aa15.14■□□□□ 0.02
Msh6-201ENSMUST00000005503 Tmx3Q8BXZ1 456 aa15.14■□□□□ 0.02
Msh6-201ENSMUST00000005503 HypkQ9CR41 129 aa15.14■□□□□ 0.02
Msh6-201ENSMUST00000005503 Chd1lQ9CXF7 900 aa15.14■□□□□ 0.02
Msh6-201ENSMUST00000005503 Fancd2Q80V62 1450 aa15.14■□□□□ 0.01
Msh6-201ENSMUST00000005503 Magi3Q9EQJ9 1476 aa15.14■□□□□ 0.01
Msh6-201ENSMUST00000005503 Cdkn1cP49919 348 aa15.14■□□□□ 0.01
Msh6-201ENSMUST00000005503 Rsph4aQ8BYM7 716 aa15.14■□□□□ 0.01
Msh6-201ENSMUST00000005503 NinlQ6ZQ12 1394 aa15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 Gse1Q3U3C9 1213 aa15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 Nup88Q8CEC0 753 aaKnown RBP15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 Adcy5P84309 1262 aa15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 EappQ5BU09 281 aa15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 Atp10dQ8K2X1 1416 aa15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 Fam135bQ9DAI6 1403 aa15.13■□□□□ 0.01
Msh6-201ENSMUST00000005503 Brf1Q8CFK2 676 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Fam184aE9PW83 1143 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Gpatch3Q8BIY1 525 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Tpm3-rs7D3Z2H9 248 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Usp19Q3UJD6 1360 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 A0A0U1RNP2 1173 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Pank2Q3U4S0 443 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 TatQ8QZR1 454 aa15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Psma5Q9Z2U1 241 aaKnown RBP15.12■□□□□ 0.01
Msh6-201ENSMUST00000005503 Unc13aQ4KUS2 1712 aa15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 Sos1Q62245 1319 aa15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 Nucb1Q02819 459 aaKnown RBP15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 Nop14Q8R3N1 860 aaKnown RBP15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 Ankrd50F7BE84 1390 aa15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 CenppQ9CZ92 286 aa15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 Cplx1P63040 134 aa15.11■□□□□ 0.01
Msh6-201ENSMUST00000005503 Med4Q9CQA5 270 aa15.1■□□□□ 0.01
Msh6-201ENSMUST00000005503 F2rP30558 430 aa15.1■□□□□ 0.01
Msh6-201ENSMUST00000005503 Aifm3Q3TY86 605 aa15.1■□□□□ 0.01
Msh6-201ENSMUST00000005503 Ppfia3P60469 1194 aa15.1■□□□□ 0.01
Msh6-201ENSMUST00000005503 Rec8Q8C5S7 591 aa15.1■□□□□ 0.01
Msh6-201ENSMUST00000005503 Ubxn4Q8VCH8 506 aa15.1■□□□□ 0.01
Msh6-201ENSMUST00000005503 Fam83gQ5SWY7 812 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Chmp7Q8R1T1 451 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Map7d2A2AG50 781 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Hvcn1Q3U2S8 269 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Ccdc66Q6NS45 935 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Pmfbp1Q9WVQ0 1022 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Kiaa1107Q80TK0 1369 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Tpm3P21107 285 aaKnown RBP15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Tceanc2Q8R2M0 207 aa15.09■□□□□ 0.01
Msh6-201ENSMUST00000005503 Gsdma3Q5Y4Y6 464 aa15.08■□□□□ 0
Msh6-201ENSMUST00000005503 Slx4ipQ9D7Y9 413 aa15.08■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 87.6 ms