RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 SKA1Q96BD8 255 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 TXLNGQ9NUQ3 528 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 ZFP37Q9Y6Q3 630 aaPredicted RBP14□□□□□ -0.17
ATRIP-208ENST00000639561 DOCK8Q8NF50 2099 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 FGF3P11487 239 aaPredicted RBP14□□□□□ -0.17
ATRIP-208ENST00000639561 SERPINB3P29508 390 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 MAXP61244 160 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 IRF9Q00978 393 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 TDGQ13569 410 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 HNRNPDQ14103 355 aaKnown RBP14□□□□□ -0.17
ATRIP-208ENST00000639561 ANO4Q32M45 955 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 NADSYN1Q6IA69 706 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 ATG14Q6ZNE5 492 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 ARID3BQ8IVW6 561 aaPredicted RBP14□□□□□ -0.17
ATRIP-208ENST00000639561 PSMG2Q969U7 264 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 VPS39Q96JC1 886 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 FSD1LQ9BXM9 530 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 MARCOQ9UEW3 520 aaPredicted RBP14□□□□□ -0.17
ATRIP-208ENST00000639561 SLC2A6Q9UGQ3 507 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 MIA3Q5JRA6 1907 aa14□□□□□ -0.17
ATRIP-208ENST00000639561 SLC38A8A6NNN8 435 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 GABRB3P28472 473 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 NUMBP49757 651 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 SMARCB1Q12824 385 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 INSCQ1MX18 579 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 SPDYAQ5MJ70 313 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 PDPK2PQ6A1A2 396 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 ESRP1Q6NXG1 681 aaKnown RBP13.99□□□□□ -0.17
ATRIP-208ENST00000639561 KDELC1Q6UW63 502 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 UTP4Q969X6 686 aaKnown RBP13.99□□□□□ -0.17
ATRIP-208ENST00000639561 SLC7A6OSQ96CW6 309 aaPredicted RBP13.99□□□□□ -0.17
ATRIP-208ENST00000639561 LRMDAQ9H2I8 198 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 NT5MQ9NPB1 228 aa13.99□□□□□ -0.17
ATRIP-208ENST00000639561 DRGXA6NNA5 263 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 ITM2AO43736 263 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 KITP10721 976 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 ARCN1P48444 511 aaKnown RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 PGGT1BP53609 377 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 CSE1LP55060 971 aaKnown RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 WNT3AP56704 352 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 STX3Q13277 289 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 PCSK7Q16549 785 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 SLC8B1Q6J4K2 584 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 GET4Q7L5D6 327 aaPredicted RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 CLEC14AQ86T13 490 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 ZC3HC1Q86WB0 502 aaKnown RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 C10orf107Q8IVU9 208 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 FATE1Q969F0 183 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 IMP4Q96G21 291 aaKnown RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 RPRD1AQ96P16 312 aaPredicted RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 YY1AP1Q9H869 796 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 KCNK12Q9HB15 430 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 COPG2Q9UBF2 871 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 DUSP12Q9UNI6 340 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 HBS1LQ9Y450 684 aaKnown RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 TCAF1Q9Y4C2 921 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 A0A096LPK6 155 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 TTC24A2A3L6 582 aaPredicted RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 TIMM44O43615 452 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 LYPLA1O75608 230 aaPredicted RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 NEBLO76041 1014 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 VAPBO95292 243 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 MMP2P08253 660 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 FSHRP23945 695 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 CSRP3P50461 194 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 RENBPP51606 427 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 RING1Q06587 406 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 GRM3Q14832 879 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 DBN1Q16643 649 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 POTEHQ6S545 545 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 CCDC117Q8IWD4 279 aaPredicted RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 C2orf15Q8WU43 125 aaKnown RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 MYADMQ96S97 322 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 TTLL2Q9BWV7 592 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 OXCT2Q9BYC2 517 aaPredicted RBP13.98□□□□□ -0.17
ATRIP-208ENST00000639561 TREX1Q9NSU2 369 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 THAP1Q9NVV9 213 aa13.98□□□□□ -0.17
ATRIP-208ENST00000639561 DNAJC6O75061 913 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 C2P06681 752 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 ARRB2P32121 409 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 ELF1P32519 619 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 ACVRL1P37023 503 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 NUBP1P53384 320 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 DSC2Q02487 901 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 CNGA3Q16281 694 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 MARC1Q5VT66 337 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
ATRIP-208ENST00000639561 DENND6AQ8IWF6 608 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 CNTN4Q8IWV2 1026 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 PPHLN1Q8NEY8 458 aaKnown RBP13.97□□□□□ -0.17
ATRIP-208ENST00000639561 PPP1R2P1Q96PQ5 205 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 GPR22Q99680 433 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 SP110Q9HB58 689 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 ATP13A1Q9HD20 1204 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 KCNK4Q9NYG8 393 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 A8MUI8 341 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 CCL16O15467 120 aa13.97□□□□□ -0.17
ATRIP-208ENST00000639561 RAMP2O60895 175 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms