RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CREB5Q02930 508 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 FAM27E3Q08E93 113 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 CSTF3Q12996 717 aaKnown RBP4.28□□□□□ -1.72
CDR1-202ENST00000625883 LAMB3Q13751 1172 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 COL28A1Q2UY09 1125 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 DPCR1Q3MIW9 517 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ESCO2Q56NI9 601 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 EPHA10Q5JZY3 1008 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 NUGGCQ68CJ6 796 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ZNF626Q68DY1 528 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 HIST2H2BCQ6DN03 193 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 HIST2H2BDQ6DRA6 164 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 CPLX2Q6PUV4 134 aaKnown RBP4.28□□□□□ -1.72
CDR1-202ENST00000625883 TSSK4Q6SA08 328 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 DENND6AQ8IWF6 608 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ARHGAP12Q8IWW6 846 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ENGASEQ8NFI3 743 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 TMEM174Q8WUU8 243 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 SMARCE1Q969G3 411 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ZNF333Q96JL9 665 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ZFYVE19Q96K21 471 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 NPFFR1Q9GZQ6 430 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 CDT1Q9H211 546 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ASAH2Q9NR71 780 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 PTGFRNQ9P2B2 879 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 HEY2Q9UBP5 337 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ADD3Q9UEY8 706 aaKnown RBP4.28□□□□□ -1.72
CDR1-202ENST00000625883 NDRG3Q9UGV2 375 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 A0A1W2PRG0 241 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 TYW5A2RUC4 315 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 TTC36A6NLP5 189 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 EIF3CLB5ME19 914 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 PTGES3LE9PB15 166 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 OVOL3O00110 214 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 BCAT2O15382 392 aaPredicted RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 ATP2C2O75185 946 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 GJB3O75712 270 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 OR2C1O95371 312 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 IFNA2P01563 188 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 CENPBP07199 599 aaPredicted RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 MMP3P08254 477 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 FGF2P09038 288 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 PCNAP12004 261 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 ENO3P13929 434 aaPredicted RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 PORP16435 677 aaPredicted RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 CHRNB2P17787 502 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 AGAP20933 346 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 SHMT1P34896 483 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 AVPR1AP37288 418 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 NLRP5P59047 1200 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 MC1RQ01726 317 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 CUL4AQ13619 759 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 KCTD2Q14681 263 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 LPIN1Q14693 890 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 TRIP6Q15654 476 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 DUSP6Q16828 381 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 DUSP28Q4G0W2 176 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 CXorf66Q5JRM2 361 aaPredicted RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 PRAMEF19Q5SWL8 479 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 HEPHL1Q6MZM0 1159 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 DPY19L2P1Q6NXN4 242 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 KLHL35Q6PF15 583 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 LCTLQ6UWM7 567 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 SZRD1Q7Z422 152 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 SRRM1Q8IYB3 904 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 BICD2Q8TD16 824 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 TMEM18Q96B42 140 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 FAM120BQ96EK7 910 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 ZC3HAV1LQ96H79 300 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 SIN3AQ96ST3 1273 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 MSTO1Q9BUK6 570 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 POLDIP3Q9BY77 421 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 FTOQ9C0B1 505 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDR1-202ENST00000625883 CCDC68Q9H2F9 335 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 SYNCQ9H7C4 482 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 KIF9Q9HAQ2 790 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 NRIP3Q9NQ35 241 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 DDX4Q9NQI0 724 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 ANKRD10Q9NXR5 420 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 RABGAP1Q9Y3P9 1069 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 LSM4Q9Y4Z0 139 aaKnown RBP4.27□□□□□ -1.73
CDR1-202ENST00000625883 RAI2Q9Y5P3 530 aa4.27□□□□□ -1.73
CDR1-202ENST00000625883 SETD1BQ9UPS6 1966 aaKnown RBP4.26□□□□□ -1.73
CDR1-202ENST00000625883 FRMD3A2A2Y4 597 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 FAM90A8PA6NJQ4 464 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 A8MZ25 164 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 VILLO15195 856 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 EPN2O95208 641 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 FAM90A13PP0C7W8 464 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 FAM90A24PP0C7X0 464 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 PPARGP37231 505 aaPredicted RBP4.26□□□□□ -1.73
CDR1-202ENST00000625883 UBA7P41226 1012 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 F2RL1P55085 397 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 CDH12P55289 794 aa4.26□□□□□ -1.73
CDR1-202ENST00000625883 GOLGA8DPQ0D2H9 430 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms