RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CARTPTQ16568 116 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 C5orf22Q49AR2 442 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM198Q66K66 360 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RANBP10Q6VN20 620 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ADGRG6Q86SQ4 1221 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MON1AQ86VX9 555 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KCNMB4Q86W47 210 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PDCD6IPQ8WUM4 868 aaKnown RBP10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PEX13Q92968 403 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 DGCR14Q96DF8 476 aaKnown RBP10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SERPINB11Q96P15 392 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 IL1RL2Q9HB29 575 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GPAMQ9HCL2 828 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 C20orf96Q9NUD7 363 aaPredicted RBP10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM216Q9P0N5 145 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CDH22Q9UJ99 828 aa10.96□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PEX11BO96011 259 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ASGR1P07306 291 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ERVK-10P10266 1014 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CD52P31358 61 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CPOXP36551 454 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ENTPD1P49961 510 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SMARCB1Q12824 385 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 OLIG2Q13516 323 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 LDLRAP1Q5SW96 308 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PCDH20Q8N6Y1 951 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 URGCPQ8TCY9 931 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CNDP1Q96KN2 507 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 OXSMQ9NWU1 459 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CDY1Q9Y6F8 540 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CASTOR2A6NHX0 329 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KCNK1O00180 336 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PENKP01210 267 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CPA3P15088 417 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 BDNFP23560 247 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 EPHA3P29320 983 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TYK2P29597 1187 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CACNB2Q08289 660 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GRAMD4Q6IC98 578 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 EPGNQ6UW88 154 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 LPCAT2Q7L5N7 544 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 STRA8Q7Z7C7 330 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZC3HC1Q86WB0 502 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SNX32Q86XE0 403 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 COLGALT2Q8IYK4 626 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 DCP1BQ8IZD4 617 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SPATA6LQ8N4H0 392 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PPP1R13LQ8WUF5 828 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 AZIN2Q96A70 460 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TBL1YQ9BQ87 522 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.95□□□□□ -0.664e-7■■■□□ 17.8
SENP3-EIF4A1-201ENST00000614237 FBXO44Q9H4M3 255 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TRPC7Q9HCX4 862 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RIMKLBQ9ULI2 386 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CROCCQ5TZA2 2017 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MYLKQ15746 1914 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 DRGXA6NNA5 263 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 BUD23O43709 281 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 USP12O75317 370 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CRTAMO95727 393 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CLIC3O95833 236 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 IGLV3-27P01718 113 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TFAP2AP05549 437 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RALBP11234 206 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CDK4P11802 303 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 PSMA3P25788 255 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CRABP2P29373 138 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SLC5A3P53794 718 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NME5P56597 212 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KCNA10Q16322 511 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KIAA0930Q6ICG6 404 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZYG11AQ6WRX3 759 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CLVS1Q8IUQ0 354 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RAVER1Q8IY67 606 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CPSF7Q8N684 471 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 BHLHE22Q8NFJ8 381 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SREK1Q8WXA9 508 aaKnown RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CATSPER2Q96P56 530 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SUDS3Q9H7L9 328 aaPredicted RBP10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 VPS45Q9NRW7 570 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 TMEM248Q9NWD8 314 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SNX13Q9Y5W8 968 aa10.95□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CHD5Q8TDI0 1954 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SLCO1B7G3V0H7 640 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 B3GAT3O94766 335 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ARSAP15289 507 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 THPOP40225 353 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 RPL5P46777 297 aaKnown RBP10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 DNAJB13P59910 316 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 HNRNPDQ14103 355 aaKnown RBP10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 NFE2Q16621 373 aaPredicted RBP10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 KLHL35Q6PF15 583 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 MAVSQ7Z434 540 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 C10orf107Q8IVU9 208 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 GIPC3Q8TF64 312 aa10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 ZNF669Q96BR6 464 aaPredicted RBP10.94□□□□□ -0.66
SENP3-EIF4A1-201ENST00000614237 SPATA17Q96L03 361 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms