RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SRPRAP08240 638 aaKnown RBP18.14■□□□□ 0.49
VRK3-225ENST00000601912 DLDP09622 509 aaKnown RBP18.14■□□□□ 0.49
VRK3-225ENST00000601912 GCAP28676 217 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 RECQLP46063 649 aaPredicted RBP18.14■□□□□ 0.49
VRK3-225ENST00000601912 SLC6A11P48066 632 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 VASPP50552 380 aaPredicted RBP18.14■□□□□ 0.49
VRK3-225ENST00000601912 RAD51Q06609 339 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 MGAT5Q09328 741 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 TRAF2Q12933 501 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 GAB4Q2WGN9 574 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 PREPLQ4J6C6 727 aaPredicted RBP18.14■□□□□ 0.49
VRK3-225ENST00000601912 ADGRD1Q6QNK2 874 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 SLC44A1Q8WWI5 657 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 LRCH3Q96II8 777 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 NSMCE3Q96MG7 304 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 DHRS4Q9BTZ2 278 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 ATP13A3Q9H7F0 1226 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 GTSE1Q9NYZ3 720 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 CTNNAL1Q9UBT7 734 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 PLA2G4CQ9UP65 541 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 DENND4AQ7Z401 1863 aa18.14■□□□□ 0.49
VRK3-225ENST00000601912 REV3LO60673 3130 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 KIF26AQ9ULI4 1882 aaPredicted RBP18.13■□□□□ 0.49
VRK3-225ENST00000601912 ZCWPW2A0A1B0GU75 182 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.13■□□□□ 0.49
VRK3-225ENST00000601912 POLR3GO15318 223 aaPredicted RBP18.13■□□□□ 0.49
VRK3-225ENST00000601912 PIAS1O75925 651 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 NMBRP28336 390 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 ST8SIA6P61647 398 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 MSLNQ13421 630 aaPredicted RBP18.13■□□□□ 0.49
VRK3-225ENST00000601912 NAB1Q13506 487 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 GRM3Q14832 879 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 EIF4HQ15056 248 aaKnown RBP18.13■□□□□ 0.49
VRK3-225ENST00000601912 TMED2Q15363 201 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 MYLK3Q32MK0 819 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 ITPRIPL2Q3MIP1 535 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 CARD16Q5EG05 197 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 ARMC12Q5T9G4 340 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 LGSNQ5TDP6 509 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 SLC26A11Q86WA9 606 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 PLPP6Q8IY26 295 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 PAF1Q8N7H5 531 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 LPCAT1Q8NF37 534 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 OR6K2Q8NGY2 324 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 BRSK1Q8TDC3 778 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 BLOC1S5Q8TDH9 187 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 CYB5D2Q8WUJ1 264 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 TLCD1Q96CP7 247 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 TUBGCP5Q96RT8 1024 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 ELOVL2Q9NXB9 296 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 EURLQ9NYK6 297 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 NUMBLQ9Y6R0 609 aa18.13■□□□□ 0.49
VRK3-225ENST00000601912 ANKRD66B4E2M5 251 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 BNIP3LO60238 219 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 SOCS5O75159 536 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 PAPSS2O95340 614 aaPredicted RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 POP4O95707 220 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 PRLP01236 227 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 C1QAP02745 245 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 SERPINA4P29622 427 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 GJA4P35212 333 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 EIF2DP41214 584 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 EPHB1P54762 984 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 MAGOHP61326 146 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 SKIV2LQ15477 1246 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 TNFAIP8L3Q5GJ75 292 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 PDPK2PQ6A1A2 396 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 TAOK1Q7L7X3 1001 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 RASSF3Q86WH2 238 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 TTC8Q8TAM2 541 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 FAM76AQ8TAV0 307 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 DCAKDQ8WVC6 231 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 SORCS1Q8WY21 1168 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 RPP25Q9BUL9 199 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 BRD9Q9H8M2 597 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 C20orf96Q9NUD7 363 aaPredicted RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 ZFATQ9P243 1243 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 ZNF180Q9UJW8 692 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 PCDHB9Q9Y5E1 797 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 IQANK1A0A1B0GTG1 560 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 CCDC78A2IDD5 438 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 CXorf49A8MYA2 514 aaPredicted RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 ANHXE9PGG2 379 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 PGLSO95336 258 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 CRTAMO95727 393 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 PDHA1P08559 390 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 KRT15P19012 456 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 KCNA5P22460 613 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 SP100P23497 879 aaPredicted RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 RPL26P61254 145 aaKnown RBP18.12■□□□□ 0.49
VRK3-225ENST00000601912 KDSRQ06136 332 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 HTR4Q13639 388 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 NUDT18Q6ZVK8 323 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 CAMK1DQ8IU85 385 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 UNC5BQ8IZJ1 945 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 CNPY4Q8N129 248 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 MYO19Q96H55 970 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 MRGPRX3Q96LB0 322 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 ZNF778Q96MU6 729 aa18.12■□□□□ 0.49
VRK3-225ENST00000601912 CPEB1Q9BZB8 566 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms