RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ZNF669Q96BR6 464 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 MYEOVQ96EZ4 313 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 MAGEB18Q96M61 343 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 SLC22A12Q96S37 553 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CCT8L2Q96SF2 557 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 SEMA3CQ99985 751 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 MGME1Q9BQP7 344 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 CINPQ9BW66 212 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 SLC46A2Q9BY10 475 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 NSRP1Q9H0G5 558 aaKnown RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 MUC3BQ9H195 1237 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 SMYD2Q9NRG4 433 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 MKS1Q9NXB0 559 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 KIAA1522Q9P206 1035 aaPredicted RBP10.5□□□□□ -0.73
LIG3-203ENST00000585370 CFAP97Q9P2B7 532 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 TBC1D14Q9P2M4 693 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 GGA2Q9UJY4 613 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 RIMKLBQ9ULI2 386 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 TCAF1Q9Y4C2 921 aa10.5□□□□□ -0.73
LIG3-203ENST00000585370 ANAPC1Q9H1A4 1944 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 A0A0D9SEW6 157 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 LEFTY2O00292 366 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 TIMM44O43615 452 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 FGF1P05230 155 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 RHOP08100 348 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 MMP2P08253 660 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 SRFP11831 508 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CREB1P16220 341 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 TPH1P17752 444 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 WEE1P30291 646 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 PLK1P53350 603 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CRADDP78560 199 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 DSC2Q02487 901 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CDK18Q07002 472 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CDH18Q13634 790 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 ANGPT1Q15389 498 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 SLC1A5Q15758 541 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 FAM182AQ5T1J6 154 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 GPR158Q5T848 1215 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 HHATQ5VTY9 493 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 RNF43Q68DV7 783 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CXorf57Q6NSI4 855 aaKnown RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 RETSATQ6NUM9 610 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 PACS1Q6VY07 963 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 RGS9BPQ6ZS82 235 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 SH2D5Q6ZV89 423 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 GET4Q7L5D6 327 aaPredicted RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 CPLX4Q7Z7G2 160 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CARNMT1Q8N4J0 409 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 ANKRD42Q8N9B4 389 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 FIBINQ8TAL6 211 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 SHKBP1Q8TBC3 707 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 DDI1Q8WTU0 396 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 USP13Q92995 863 aaPredicted RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 ATP2A3Q93084 1043 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 WBP2Q969T9 261 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 OTUB2Q96DC9 234 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 IFT43Q96FT9 208 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 APOPT1Q96IL0 206 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CABS1Q96KC9 395 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 FCRL3Q96P31 734 aaPredicted RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 ZNF317Q96PQ6 595 aaPredicted RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 FEM1AQ9BSK4 669 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 RPP25Q9BUL9 199 aaKnown RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 C2orf49Q9BVC5 232 aaPredicted RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 IQCGQ9H095 443 aaKnown RBP10.49□□□□□ -0.73
LIG3-203ENST00000585370 VPS11Q9H270 941 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CHRAC1Q9NRG0 131 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CA14Q9ULX7 337 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 CACNA1IQ9P0X4 2223 aa10.49□□□□□ -0.73
LIG3-203ENST00000585370 SHROOM3Q8TF72 1996 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 CBX4O00257 560 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 STK25O00506 426 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 COPEO14579 308 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 SLC9A3R1O14745 358 aaPredicted RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 INSIG1O15503 277 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 SIN3BO75182 1162 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 ASMTLO95671 621 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 NDST3O95803 873 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 FSHRP23945 695 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 CCNFP41002 786 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 MAPK8P45983 427 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 CSNK1DP48730 415 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 NTHL1P78549 312 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 PDE1BQ01064 536 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 HTR4Q13639 388 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 MPP2Q14168 576 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 CYTH1Q15438 398 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 DBN1Q16643 649 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 ZSCAN26Q16670 478 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 INSCQ1MX18 579 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 TEDDM1Q5T9Z0 273 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 KIAA0930Q6ICG6 404 aaPredicted RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 KIAA0408Q6ZU52 694 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 MICALCLQ6ZW33 695 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 GRASPQ7Z6J2 395 aaPredicted RBP10.48□□□□□ -0.73
LIG3-203ENST00000585370 TAX1BP1Q86VP1 789 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 KCNMB4Q86W47 210 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 CNTN4Q8IWV2 1026 aa10.48□□□□□ -0.73
LIG3-203ENST00000585370 TRIM42Q8IWZ5 723 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms