RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PDHA1P08559 390 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 SERPINF2P08697 491 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 TIMP2P16035 220 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ITIH2P19823 946 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ITGB7P26010 798 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 RPL22P35268 128 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 P2RY2P41231 377 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ABL2P42684 1182 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 FNTAP49354 379 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 NEK3P51956 506 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 SRSF5Q13243 272 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 PUM1Q14671 1186 aaKnown RBP eCLIP8.64□□□□□ -1.03
NUP88-211ENST00000575976 PCSK7Q16549 785 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 PARP6Q2NL67 630 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 P3H1Q32P28 736 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ZNF528Q3MIS6 628 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 TTC31Q49AM3 519 aaPredicted RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 USP39Q53GS9 565 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 CFAP58Q5T655 872 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 PIP5KL1Q5T9C9 394 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 FAXCQ5TGI0 409 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 AGBL4Q5VU57 503 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ITPRIPL1Q6GPH6 555 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 KDELC1Q6UW63 502 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ARHGEF18Q6ZSZ5 1173 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 USP30Q70CQ3 517 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ERN2Q76MJ5 926 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 FAM124AQ86V42 546 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 KLHL7Q8IXQ5 586 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 TAB3Q8N5C8 712 aaPredicted RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 FAM160A2Q8N612 972 aaPredicted RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 SPATA4Q8NEY3 305 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 HCAR2Q8TDS4 363 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 PDCD6IPQ8WUM4 868 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 FAM131CQ96AQ9 280 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ECHDC3Q96DC8 303 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 OXNAD1Q96HP4 312 aaPredicted RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 PPP1R16AQ96I34 528 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 GORASP1Q9BQQ3 440 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 TDRD1Q9BXT4 1180 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 HDAC8Q9BY41 377 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 DDX47Q9H0S4 455 aaKnown RBP8.64□□□□□ -1.03
NUP88-211ENST00000575976 SEMA4AQ9H3S1 761 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 DKK3Q9UBP4 350 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 FAM153AQ9UHL3 310 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 CHKBQ9Y259 395 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 PCDHB9Q9Y5E1 797 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 ACACBO00763 2458 aa8.64□□□□□ -1.03
NUP88-211ENST00000575976 CCDC188H7C350 402 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 HRO43593 1189 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PGLSO95336 258 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 CPP00450 1065 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PRLP01236 227 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 KRT14P02533 472 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PRKCGP05129 697 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ADRB3P13945 408 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 BCKDHBP21953 392 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 CD6P30203 668 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 OXTRP30559 389 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ACSL1P33121 698 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ACTN2P35609 894 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PTGIRP43119 386 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 GEMP55040 296 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 WNT3AP56704 352 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 TAS2R38P59533 333 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 LMNB2Q03252 620 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 CKAP4Q07065 602 aaKnown RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 C2orf54Q08AI8 447 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 SFSWAPQ12872 951 aaKnown RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 TUBB2AQ13885 445 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PRPSAP1Q14558 356 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PTPRRQ15256 657 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 TRIP13Q15645 432 aaPredicted RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 SLC14A2Q15849 920 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 UGP2Q16851 508 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 WHAMMP3Q1A5X7 153 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 LRRC73Q5JTD7 316 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ARMC12Q5T9G4 340 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 FBXL19Q6PCT2 694 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 KDELC2Q7Z4H8 507 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 TTC7BQ86TV6 843 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 KBTBD6Q86V97 674 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 KLHDC8BQ8IXV7 354 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PAF1Q8N7H5 531 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 CCDC89Q8N998 374 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ZBTB44Q8NCP5 570 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 OR14C36Q8NHC7 312 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PIH1D2Q8WWB5 315 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 TOE1Q96GM8 510 aaKnown RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 TRIB3Q96RU7 358 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 KRT12Q99456 494 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 MLPHQ9BV36 600 aaPredicted RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 TUBB2BQ9BVA1 445 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 FAM126AQ9BYI3 521 aaPredicted RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 BTBD1Q9H0C5 482 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ETNK1Q9HBU6 452 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 PCDH9Q9HC56 1237 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 ZSCAN32Q9NX65 697 aa8.63□□□□□ -1.03
NUP88-211ENST00000575976 WSB2Q9NYS7 404 aaPredicted RBP8.63□□□□□ -1.03
NUP88-211ENST00000575976 PAK5Q9P286 719 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms