RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 GDF3Q9NR23 364 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 AASDHPPTQ9NRN7 309 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 HOMER3Q9NSC5 361 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TOR4AQ9NXH8 423 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 SMARCAL1Q9NZC9 954 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 BTBD3Q9Y2F9 522 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 UTP11Q9Y3A2 253 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 AKAP13Q12802 2813 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 SPEGQ15772 3267 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 CABIN1Q9Y6J0 2220 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 TMEM8BA6NDV4 472 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 FAM187AA6NFU0 413 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 PRAMEF26H0Y7S4 382 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 FGF10O15520 208 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 KDELR3O43731 214 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 AP1G1O43747 822 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 HYAL3O43820 417 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 BNIP3LO60238 219 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 PHF2O75151 1096 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 LEFTY1O75610 366 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 SPINK2P20155 84 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 EPHA8P29322 1005 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 EPHB2P29323 1055 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 TNNT3P45378 269 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 RXRGP48443 463 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 PEX5P50542 639 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 NEK3P51956 506 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 YBEYP58557 167 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 ACAP1Q15027 740 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 POLD3Q15054 466 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 ST3GAL2Q16842 350 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 ZNF284Q2VY69 593 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 POM121L1PQ3SYA9 428 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 PARP15Q460N3 678 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 TMEM259Q4ZIN3 620 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 CARD16Q5EG05 197 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 LRRC38Q5VT99 294 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 HORMAD1Q86X24 394 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 UMODL1-AS1Q8N2C9 162 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 PYROXD2Q8N2H3 581 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 NIPA2Q8N8Q9 360 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 KDF1Q8NAX2 398 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 GRIN3AQ8TCU5 1115 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 ALG3Q92685 438 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 RBM41Q96IZ5 413 aaKnown RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 PKNOX2Q96KN3 472 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 EPAS1Q99814 870 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 HEPHQ9BQS7 1158 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 DYRK4Q9NR20 520 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 FAM114A2Q9NRY5 505 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 ZNF446Q9NWS9 450 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 DDX56Q9NY93 547 aaKnown RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 FEZ2Q9UHY8 353 aaPredicted RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 KLK13Q9UKR3 277 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 APOBEC2Q9Y235 224 aaKnown RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 FCF1Q9Y324 198 aaKnown RBP10.74□□□□□ -0.69
LITAF-216ENST00000574848 PCDHB9Q9Y5E1 797 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 KNL1Q8NG31 2342 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 PTPRBP23467 1997 aa10.74□□□□□ -0.69
LITAF-216ENST00000574848 ASPMQ8IZT6 3477 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 CACNA1BQ00975 2339 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 A0A1W2PQU0 124 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 TMEM191CA6NGB0 347 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 TLR4O00206 839 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 MAGEC1O60732 1142 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 ADRB3P13945 408 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 SSR1P43307 286 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 FNTAP49354 379 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 DR1Q01658 176 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 GUCY2DQ02846 1103 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 HADHQ16836 314 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 INO80DQ53TQ3 878 aaPredicted RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 KIAA1161Q6NSJ0 714 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 CYP4V2Q6ZWL3 525 aaPredicted RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 PARS2Q7L3T8 475 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 SPATS2Q86XZ4 545 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 PSTKQ8IV42 348 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 KATNAL2Q8IYT4 538 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 ARFGAP1Q8N6T3 406 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 GOLGA6L1Q8N7Z2 621 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 OR2AP1Q8NGE2 309 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 EXD1Q8NHP7 514 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 RHBDD1Q8TEB9 315 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 SAP25Q8TEE9 199 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 SETD7Q8WTS6 366 aaKnown RBP10.73□□□□□ -0.69
LITAF-216ENST00000574848 AP1M1Q9BXS5 423 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 OSBPL1AQ9BXW6 950 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 FUT8Q9BYC5 575 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 FAM129AQ9BZQ8 928 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 CATSPERBQ9H7T0 1116 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 PDFQ9HBH1 243 aa10.73□□□□□ -0.69
LITAF-216ENST00000574848 GPR27Q9NS67 375 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms