RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SMAD1Q15797 465 aaKnown RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 CCDC6Q16204 474 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 PCSK7Q16549 785 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 ADGRF1Q5T601 910 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 NLRP9Q7RTR0 991 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 CLEC14AQ86T13 490 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 CFAP52Q8N1V2 620 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 MRPL17Q9NRX2 175 aaKnown RBP23.47■■□□□ 1.35
LINC00543-201ENST00000567234 ANKRD6Q9Y2G4 727 aa23.47■■□□□ 1.35
LINC00543-201ENST00000567234 ZBBXA8MT70 800 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 VAPBO95292 243 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 TOP3BO95985 862 aaKnown RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 KLKB1P03952 638 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 DLDP09622 509 aaKnown RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 TARSP26639 723 aaKnown RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 ARNTP27540 789 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 CHRNA4P43681 627 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 OVGP1Q12889 678 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 STX3Q13277 289 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 MSLNQ13421 630 aaPredicted RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 ZNF235Q14590 738 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 FASTKD1Q53R41 847 aaKnown RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 PPM1JQ5JR12 505 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 DNAJB7Q7Z6W7 309 aaPredicted RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 SETD3Q86TU7 594 aaPredicted RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 GATA6Q92908 595 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 ATXN3LQ9H3M9 355 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 THAP1Q9NVV9 213 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 CXXC1Q9P0U4 656 aaPredicted RBP23.46■■□□□ 1.35
LINC00543-201ENST00000567234 STOML2Q9UJZ1 356 aa23.46■■□□□ 1.35
LINC00543-201ENST00000567234 A0A096LPK6 155 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 ILVBLA1L0T0 632 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 DNAJC6O75061 913 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 PENKP01210 267 aaPredicted RBP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 HOXD9P28356 352 aaPredicted RBP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 TWF1Q12792 350 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 PPIGQ13427 754 aaKnown RBP eCLIP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 CNGA3Q16281 694 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 C16orf46Q6P387 395 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 KIAA0408Q6ZU52 694 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 CMC1Q7Z7K0 106 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 RFWD2Q8NHY2 731 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 EZH1Q92800 747 aaPredicted RBP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 ABHD8Q96I13 439 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 FEM1CQ96JP0 617 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 RNF38Q9H0F5 515 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 TMEM216Q9P0N5 145 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 INSL5Q9Y5Q6 135 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 OBSL1O75147 1896 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 A0A1B0GVM2 712 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 TCAF2A6NFQ2 919 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 PRKCGP05129 697 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 ARFIP2P53365 341 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 THOC5Q13769 683 aaKnown RBP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 RFTN1Q14699 578 aaPredicted RBP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 KRT72Q14CN4 511 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 TSTD2Q5T7W7 516 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 MBLAC2Q68D91 279 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 ITIH5Q86UX2 942 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 SLC25A41Q8N5S1 370 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 FAM81AQ8TBF8 368 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 CALML6Q8TD86 181 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 PRICKLE1Q96MT3 831 aaPredicted RBP23.45■■□□□ 1.34
LINC00543-201ENST00000567234 SEMA3CQ99985 751 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 KCNK13Q9HB14 408 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 ZFP69BQ9UJL9 534 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 SSX2IPQ9Y2D8 614 aa23.45■■□□□ 1.34
LINC00543-201ENST00000567234 KDELR3O43731 214 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 FGBP02675 491 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 AHSGP02765 367 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 C2P06681 752 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 PDHA1P08559 390 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 GRK2P25098 689 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 SEPT6Q14141 434 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 IHHQ14623 411 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 GRM3Q14832 879 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 PCLAFQ15004 111 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 PABPC1LQ4VXU2 614 aaKnown RBP23.44■■□□□ 1.34
LINC00543-201ENST00000567234 TMEM240Q5SV17 173 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 KDELC2Q7Z4H8 507 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 CRLF3Q8IUI8 442 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 HERC6Q8IVU3 1022 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 C2CD4AQ8NCU7 369 aaPredicted RBP23.44■■□□□ 1.34
LINC00543-201ENST00000567234 PEX13Q92968 403 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 ATXN7L3BQ96GX2 97 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 BTBD10Q9BSF8 475 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 GKN1Q9NS71 199 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 COPG2Q9UBF2 871 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 SEPT3Q9UH03 358 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 DCTN4Q9UJW0 460 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 AGO1Q9UL18 857 aaKnown RBP23.44■■□□□ 1.34
LINC00543-201ENST00000567234 TBC1D30Q9Y2I9 924 aa23.44■■□□□ 1.34
LINC00543-201ENST00000567234 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.43■■□□□ 1.34
LINC00543-201ENST00000567234 A0A0D9SEW6 157 aa23.43■■□□□ 1.34
LINC00543-201ENST00000567234 CCDC78A2IDD5 438 aa23.43■■□□□ 1.34
LINC00543-201ENST00000567234 F8W8V4 182 aa23.43■■□□□ 1.34
LINC00543-201ENST00000567234 GOLGA8TH3BQL2 631 aa23.43■■□□□ 1.34
LINC00543-201ENST00000567234 LILRB3O75022 631 aa23.43■■□□□ 1.34
LINC00543-201ENST00000567234 APOA4P06727 396 aa23.43■■□□□ 1.34
LINC00543-201ENST00000567234 COL6A2P12110 1019 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms