RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TSC22D3Q99576 134 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 WDR41Q9HAD4 459 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 GMIPQ9P107 970 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 MARCH4Q9P2E8 410 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 TCAF2A6NFQ2 919 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 NPHS1O60500 1241 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 ASGR1P07306 291 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 MMP2P08253 660 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 UQCRBP14927 111 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 ATP5F1P24539 256 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 ALDH1A3P47895 512 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 SERPINH1P50454 418 aaKnown RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 RAB27AP51159 221 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 POU4F1Q01851 419 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 FLOT2Q14254 428 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 MAPRE1Q15691 268 aaKnown RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 IL31Q6EBC2 164 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 TMEM207Q6UWW9 146 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PIM3Q86V86 326 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 BHLHE22Q8NFJ8 381 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 HMGCLL1Q8TB92 370 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 IGSF8Q969P0 613 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PSMG2Q969U7 264 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 GCNAQ96QF7 691 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PRPF19Q9UMS4 504 aaKnown RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PRG3Q9Y2Y8 225 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 CCDC189A1A4V9 331 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SLCO1B7G3V0H7 640 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 KPNA6O60684 536 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SLC4A1P02730 911 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 VCLP18206 1134 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 CDKN2DP55273 166 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 TBX4P57082 545 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 C1QTNF8P60827 252 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PFKPQ01813 784 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 ART3Q13508 389 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 MS4A13Q5J8X5 152 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 HECTD2Q5U5R9 776 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 LCA5Q86VQ0 697 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 CCDC117Q8IWD4 279 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PQLC1Q8N2U9 271 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 OR6P1Q8NGX9 317 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PDCD6IPQ8WUM4 868 aaKnown RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 MYEOVQ96EZ4 313 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 IMP4Q96G21 291 aaKnown RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SERPINB11Q96P15 392 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 GBP5Q96PP8 586 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SP110Q9HB58 689 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 NCKIPSDQ9NZQ3 722 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PDP2Q9P2J9 529 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 DTNAQ9Y4J8 743 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PTPRDP23468 1912 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 FNDC1Q4ZHG4 1894 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 HEATR9A2RTY3 570 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 CASQ2O14958 399 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 GRIA2P42262 883 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 KCNC1P48547 511 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 POLD2P49005 469 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 HK2P52789 917 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 CRHR2Q13324 411 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 KCNA10Q16322 511 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 MMEL1Q495T6 779 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 OGFRL1Q5TC84 451 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 RAP1GAP2Q684P5 730 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 CUZD1Q86UP6 607 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 MIB1Q86YT6 1006 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 IFNL1Q8IU54 200 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF683Q8IZ20 524 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PGAM4Q8N0Y7 254 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PGBD5Q8N414 524 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 KLHDC9Q8NEP7 349 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SPPL2BQ8TCT7 592 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 EXT2Q93063 718 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 HDAC10Q969S8 669 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SLC39A13Q96H72 371 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 MAELQ96JY0 434 aaKnown RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 B3GALT6Q96L58 329 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 SERPINI1Q99574 410 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 COPS7BQ9H9Q2 264 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 ATP13A1Q9HD20 1204 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PRDM5Q9NQX1 630 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 PSMD13Q9UNM6 376 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 AK5Q9Y6K8 562 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 BRCA2P51587 3418 aa10.11□□□□□ -0.79
LRRC28-216ENST00000559819 TDRD15B5MCY1 1934 aaKnown RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 TYMPP19971 482 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 HTR7P34969 479 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 OR1G1P47890 313 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 LEPRP48357 1165 aaKnown RBP10.1□□□□□ -0.79
LRRC28-216ENST00000559819 DNAJB13P59910 316 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 MED21Q13503 144 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 HERC3Q15034 1050 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 FAM83EQ2M2I3 478 aa10.1□□□□□ -0.79
LRRC28-216ENST00000559819 SIRPB2Q5JXA9 342 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms