RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 SSX4O60224 188 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 GRIN3BO60391 1043 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 HEXBP07686 556 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 MBL2P11226 248 aaPredicted RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 NPR1P16066 1061 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 RAB3AP20336 220 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 GCKRQ14397 625 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ZNF181Q2M3W8 571 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 GPRIN3Q6ZVF9 776 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 NLGN4XQ8N0W4 816 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 KDM1BQ8NB78 822 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ATOH1Q92858 354 aaPredicted RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 NCLNQ969V3 563 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ALOXE3Q9BYJ1 711 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 TMEM245Q9H330 911 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ZCCHC4Q9H5U6 513 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ZNF275Q9NSD4 429 aaPredicted RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 MARCOQ9UEW3 520 aaPredicted RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 MFHAS1Q9Y4C4 1052 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 DIP2CQ9Y2E4 1556 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 PSTPIP1O43586 416 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ABCB7O75027 752 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 PLA2G16P53816 162 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ERVFC1P60507 584 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 BAATQ14032 418 aaPredicted RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 GRIK4Q16099 956 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 CTF1Q16619 201 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 TYW3Q6IPR3 259 aaKnown RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 METTL23Q86XA0 190 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 SLC13A5Q86YT5 568 aaPredicted RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 CMTR1Q8N1G2 835 aaKnown RBP11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 MCOLN3Q8TDD5 553 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 C20orf27Q9GZN8 174 aa11.12□□□□□ -0.63
SEMA4B-204ENST00000558065 ZMPSTE24O75844 475 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 INMTO95050 263 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 KITP10721 976 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 MSX2P35548 267 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 GARSP41250 739 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 CCNA1P78396 465 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ALDH6A1Q02252 535 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 SMTNL2Q2TAL5 461 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 TEX44Q53QW1 395 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ASB12Q8WXK4 309 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 RILPQ96NA2 401 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 KLF6Q99612 283 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ASB7Q9H672 318 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 TMLHEQ9NVH6 421 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 HECAQ9UBI9 543 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 PCDHGA9Q9Y5G4 932 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 HK1P19367 917 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 MAGP20916 626 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 MEOX2P50222 304 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FASTKD3Q14CZ7 662 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 MTX3Q5HYI7 312 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 HORMAD1Q86X24 394 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 PALM2Q8IXS6 379 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 OR4D10Q8NGI6 311 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 DLG3Q92796 817 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 CD101Q93033 1021 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FYTTD1Q96QD9 318 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ZSWIM1Q9BR11 485 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 TRIM9Q9C026 710 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ARMT1Q9H993 441 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ITM2CQ9NQX7 267 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 TRMT6Q9UJA5 497 aaKnown RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FBXO5Q9UKT4 447 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 A0A1B0GTQ1 180 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 RNF224P0DH78 156 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 C21orf58P58505 322 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 NKX3-2P78367 333 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 CREMQ03060 361 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 BST1Q10588 318 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FAPQ12884 760 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 BROXQ5VW32 411 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 ZNF425Q6IV72 752 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 METTL4Q8N3J2 472 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 PIK3C3Q8NEB9 887 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FAM111AQ96PZ2 611 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 GAS2L1Q99501 681 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 KCTD14Q9BQ13 255 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 FUNDC2Q9BWH2 189 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 TRIM45Q9H8W5 580 aaPredicted RBP11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 LRRC40Q9H9A6 602 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 SRRDQ9UH36 339 aa11.11□□□□□ -0.63
SEMA4B-204ENST00000558065 PLCH1Q4KWH8 1693 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 TRIM49D1C9J1S8 452 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 SOCS2O14508 198 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 PHGDHO43175 533 aaKnown RBP11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 TBX1O43435 398 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 STARD3NLO95772 234 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 WEE2P0C1S8 567 aa11.1□□□□□ -0.63
SEMA4B-204ENST00000558065 TRHRP34981 398 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms