RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 GPR12P47775 334 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 MVDP53602 400 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 TUBA1BP68363 451 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 EEF1A2Q05639 463 aaKnown RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 BYSLQ13895 437 aaKnown RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 MYBPC2Q14324 1141 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 KIF19Q2TAC6 998 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 CCDC38Q502W7 563 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 ATOH1Q92858 354 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 KTI12Q96EK9 354 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 HERC2P3Q9BVR0 1158 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 PTPRUQ92729 1446 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 ROCK1Q13464 1354 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 KANK1Q14678 1352 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 PLEKHG1Q9ULL1 1385 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 LOC102724159A0A0B4J2E5 919 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 TOM1O60784 492 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 CSF1P09603 554 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 GJC1P36383 396 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 PRKAA2P54646 552 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 ARHGAP8P85298 464 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 BNC1Q01954 994 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 POU3F1Q03052 451 aaPredicted RBP5.29□□□□□ -1.56
PRPF39-209ENST00000556353 PWP2Q15269 919 aaKnown RBP5.29□□□□□ -1.56
PRPF39-209ENST00000556353 AP5B1Q2VPB7 878 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 USP43Q70EL4 1123 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 POF1BQ8WVV4 589 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 NCSTNQ92542 709 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 TXNDC15Q96J42 360 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 NPFFR1Q9GZQ6 430 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 RETREG1Q9H6L5 497 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 DDX31Q9H8H2 851 aaKnown RBP5.29□□□□□ -1.56
PRPF39-209ENST00000556353 MDFICQ9P1T7 246 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 LAMC1P11047 1609 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 FAM135BQ49AJ0 1406 aa5.29□□□□□ -1.56
PRPF39-209ENST00000556353 IGLV5-52A0A0A0MRZ9 124 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 SRRM3A6NNA2 597 aaPredicted RBP5.28□□□□□ -1.56
PRPF39-209ENST00000556353 HBP1O60381 514 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 IL1AP01583 271 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 DAOP14920 347 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 MTNR1AP48039 350 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 CTTNQ14247 550 aaKnown RBP5.28□□□□□ -1.56
PRPF39-209ENST00000556353 IL13RA2Q14627 380 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 BRD3Q15059 726 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 TIGD6Q17RP2 521 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 NEXN-AS1Q8NBZ9 246 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 CSGALNACT1Q8TDX6 532 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 WFIKKN2Q8TEU8 576 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 UBE2Q2Q8WVN8 375 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 NR4A3Q92570 626 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 RUBCNQ92622 972 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 IGSF21Q96ID5 467 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 CXorf56Q9H5V9 222 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 SAYSD1Q9NPB0 183 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 GRHPRQ9UBQ7 328 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 SRP68Q9UHB9 627 aaKnown RBP5.28□□□□□ -1.56
PRPF39-209ENST00000556353 KCNG2Q9UJ96 466 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 DAAM1Q9Y4D1 1078 aa5.28□□□□□ -1.56
PRPF39-209ENST00000556353 RRBP1Q9P2E9 1410 aaKnown RBP5.28□□□□□ -1.56
PRPF39-209ENST00000556353 RGPD8O14715 1765 aaPredicted RBP5.27□□□□□ -1.57
PRPF39-209ENST00000556353 FAM157AC9JC47 383 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 IPO5O00410 1097 aaKnown RBP5.27□□□□□ -1.57
PRPF39-209ENST00000556353 TNNT1P13805 278 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 MXI1P50539 228 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 GOLGA8FQ08AF8 430 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 GRSF1Q12849 480 aaKnown RBP eCLIP5.27□□□□□ -1.57
PRPF39-209ENST00000556353 ZNF718Q3SXZ3 478 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 ZNF484Q5JVG2 852 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 GFI1BQ5VTD9 330 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 PPP1R10Q96QC0 940 aaKnown RBP5.27□□□□□ -1.57
PRPF39-209ENST00000556353 IL25Q9H293 177 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 MARF1Q9Y4F3 1742 aaKnown RBP5.27□□□□□ -1.57
PRPF39-209ENST00000556353 ASXL1Q8IXJ9 1541 aa5.27□□□□□ -1.57
PRPF39-209ENST00000556353 KNDC1Q76NI1 1749 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 NAIPQ13075 1403 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 A0A1B0GVM2 712 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 CHL1O00533 1208 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 DDNO94850 711 aaPredicted RBP5.26□□□□□ -1.57
PRPF39-209ENST00000556353 SNRNP70P08621 437 aaKnown RBP5.26□□□□□ -1.57
PRPF39-209ENST00000556353 DCTDP32321 178 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 ADORA2A-AS1P86434 159 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 WBP2NLQ6ICG8 309 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 TYW3Q6IPR3 259 aaKnown RBP5.26□□□□□ -1.57
PRPF39-209ENST00000556353 VPS37AQ8NEZ2 397 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 OR4N2Q8NGD1 307 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 GPT2Q8TD30 523 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 SDCCAG3Q96C92 435 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 WDR6Q9NNW5 1121 aaKnown RBP5.26□□□□□ -1.57
PRPF39-209ENST00000556353 NLKQ9UBE8 527 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 SLC45A1Q9Y2W3 748 aa5.26□□□□□ -1.57
PRPF39-209ENST00000556353 LINC01565O15544 149 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 PTPN9P43378 593 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 AARSP49588 968 aaKnown RBP eCLIP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 CUL4BQ13620 913 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 TRIM14Q14142 442 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 RPE65Q16518 533 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 ZNF672Q499Z4 452 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 FAM76BQ5HYJ3 339 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 JMJD6Q6NYC1 403 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms