RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 NTMT1Q9BV86 223 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 HOXD1Q9GZZ0 328 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 MKRN2Q9H000 416 aaKnown RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 OLAHQ9NV23 265 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 DMAC2Q9NW81 257 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 GNPTGQ9UJJ9 305 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 CROCCQ5TZA2 2017 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TCRBV7S3A2A0A539 114 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TCRBV9S1A1TA0A576 114 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 CFAP99D6REC4 459 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 EIF3DO15371 548 aaKnown RBP eCLIP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 SNNO75324 88 aaPredicted RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 MYO1DO94832 1006 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 GNA12Q03113 381 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PRKCQQ04759 706 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 VWA5B1Q5TIE3 1220 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 STRIP1Q5VSL9 837 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 GTF2IRD2BQ6EKJ0 949 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 USP17L6PQ6QN14 398 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 GTF2IRD2Q86UP8 949 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 SLC15A4Q8N697 577 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 RNF148Q8N7C7 305 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 BEND7Q8N7W2 519 aaPredicted RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 OR6S1Q8NH40 331 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 AFG1LQ8WV93 481 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 KBTBD7Q8WVZ9 684 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TRIT1Q9H3H1 467 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 COQ3Q9NZJ6 369 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 ERGIC3Q9Y282 383 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TOR1AO14656 332 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 BET1O15155 118 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 NUPL2O15504 423 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 DCXO43602 365 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PROSCO94903 275 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TP53P04637 393 aaPredicted RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 JAK1P23458 1154 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TRHRP34981 398 aaPredicted RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 IREB2P48200 963 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TPTEP56180 551 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PPP2R5DQ14738 602 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 ZBED5Q49AG3 693 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PRR16Q569H4 304 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 GPATCH4Q5T3I0 446 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 STXBP5Q5T5C0 1151 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 GPR107Q5VW38 600 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PDPK2PQ6A1A2 396 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 RINT1Q6NUQ1 792 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TRIM72Q6ZMU5 477 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 IGDCC3Q8IVU1 814 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 KATNAL2Q8IYT4 538 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PIWIL2Q8TC59 973 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 CPT1BQ92523 772 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TP53INP1Q96A56 240 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 WNK4Q96J92 1243 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TBATAQ96M53 351 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 ZNF778Q96MU6 729 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 CDK5RAP1Q96SZ6 601 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 CDADC1Q9BWV3 514 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 LHX5Q9H2C1 402 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 SEMA6AQ9H2E6 1030 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 RPF2Q9H7B2 306 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 CDH7Q9ULB5 785 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 PCDHGB7Q9Y5F8 929 aa10.43□□□□□ -0.74
EFCAB11-208ENST00000555872 TISP43B9A030 160 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 G3V3G9 751 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 H3BMQ9 156 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 AIM2O14862 343 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 PSTPIP1O43586 416 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 PPP1R11O60927 126 aaPredicted RBP10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 NBNO60934 754 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 XRCC1P18887 633 aaPredicted RBP10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 GABRB3P28472 473 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 HLA-FP30511 346 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 VAMP7P51809 220 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 EIF3EP60228 445 aaKnown RBP10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 GTF2IP78347 998 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 IL1RL1Q01638 556 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 SPIRE1Q08AE8 756 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 POU6F1Q14863 301 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 AARS2Q5JTZ9 985 aaKnown RBP10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 ZNF425Q6IV72 752 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 LIN54Q6MZP7 749 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 KIAA1841Q6NSI8 718 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 RHOUQ7L0Q8 258 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 LYSMD3Q7Z3D4 306 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 POLNQ7Z5Q5 900 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 BBS7Q8IWZ6 715 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 FAM178BQ8IXR5 827 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 PPIL6Q8IXY8 311 aa10.42□□□□□ -0.74
EFCAB11-208ENST00000555872 MCOLN2Q8IZK6 566 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms