RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PSMD8P48556 350 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 NPY2RP49146 381 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 CARSP49589 748 aaKnown RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 STARD6P59095 220 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 VSNL1P62760 191 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 NIPAL4Q0D2K0 466 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ELP6Q0PNE2 266 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 PDIA2Q13087 525 aaKnown RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 CCINQ13939 588 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 GALNT3Q14435 633 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 SLC1A5Q15758 541 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 BBS9Q3SYG4 887 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ZNF805Q5CZA5 627 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 KDELC1Q6UW63 502 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 NLRP9Q7RTR0 991 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 KDELC2Q7Z4H8 507 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 PRPF39Q86UA1 669 aaKnown RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ZBED8Q8IZ13 594 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 SLC25A41Q8N5S1 370 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ZNF366Q8N895 744 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 TXNDC5Q8NBS9 432 aaKnown RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 TMIEQ8NEW7 156 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 OR2T3Q8NH03 318 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 GANCQ8TET4 914 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 GABRG3Q99928 467 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 HINFPQ9BQA5 517 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 MLPHQ9BV36 600 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 OSBPL6Q9BZF3 934 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 SUV39H2Q9H5I1 410 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 MMP17Q9ULZ9 603 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 MAD1L1Q9Y6D9 718 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 MAGEB16A2A368 324 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 NEMP1O14524 444 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 USP12O75317 370 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PGLSO95336 258 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 TTC4O95801 387 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 MMP2P08253 660 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 IVDP26440 423 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 WASP42768 502 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 NEK3P51956 506 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 DGKEP52429 567 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 ZBTB16Q05516 673 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 SIGLEC14Q08ET2 396 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 MESP2Q0VG99 397 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 CAMK2GQ13555 558 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-220ENST00000555634 ENPP2Q13822 863 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 ARHGEF7Q14155 803 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 SPARCL1Q14515 664 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 CCDC38Q502W7 563 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 SIRPB2Q5JXA9 342 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 ANKRD22Q5VYY1 191 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 KCTD11Q693B1 232 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 GLT6D1Q7Z4J2 308 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 STK40Q8N2I9 435 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 IL17RCQ8NAC3 791 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PJA1Q8NG27 643 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 OR52K1Q8NGK4 314 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PIP4K2CQ8TBX8 421 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 STAMBPL1Q96FJ0 436 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 RUFY1Q96T51 708 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 OMDQ99983 421 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 APOL2Q9BQE5 337 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-220ENST00000555634 TRABDQ9H4I3 376 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 ARFGAP3Q9NP61 516 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 SAYSD1Q9NPB0 183 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 CASS4Q9NQ75 786 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 DKK3Q9UBP4 350 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 RAB21Q9UL25 225 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PHTF1Q9UMS5 762 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 CHKBQ9Y259 395 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 NCKAP1Q9Y2A7 1128 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PKP3Q9Y446 797 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 PCDHGC4Q9Y5F7 938 aa11.28□□□□□ -0.6
SHMT2-220ENST00000555634 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 CAPN8A6NHC0 703 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 FAM170BA6NMN3 283 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 C2orf81A6NN90 581 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 HTRA2O43464 458 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-220ENST00000555634 DCXO43602 365 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 AGTP01019 485 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 SLC4A1P02730 911 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 POLBP06746 335 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 PGAM1P18669 254 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 C5AR1P21730 350 aa11.27□□□□□ -0.61
SHMT2-220ENST00000555634 CD72P21854 359 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms