RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ZNF846Q147U1 533 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ARMC3Q5W041 872 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SLC8B1Q6J4K2 584 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SHQ1Q6PI26 577 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 EIF3MQ7L2H7 374 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TBC1D15Q8TC07 691 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FBXL3Q9UKT7 428 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SMCHD1A6NHR9 2005 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PROCP04070 461 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 USP17L7P0C7H9 530 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 BDH1Q02338 343 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SLC29A2Q14542 456 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GPAT2Q6NUI2 795 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CLIP4Q8N3C7 705 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CATSPER1Q8NEC5 780 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SLC25A44Q96H78 314 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF518BQ9C0D4 1074 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KCNF1Q9H3M0 494 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MPP6Q9NZW5 540 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 LRFN1Q9P244 771 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CNOT6Q9ULM6 557 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CDYLQ9Y232 598 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CNOT1A5YKK6 2376 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HNRNPRO43390 633 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NDUFA10O95299 355 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HSPA13P48723 471 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 VAMP7P51809 220 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TKTL1P51854 596 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FBXO42Q6P3S6 717 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SEMA4CQ9C0C4 833 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SPATA6Q9NWH7 488 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MOCS1Q9NZB8 636 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HCN4Q9Y3Q4 1203 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RAD54BQ9Y620 910 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL41O60662 606 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KERAO60938 352 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GLRA3O75311 464 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SGPL1O95470 568 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HOXD11P31277 338 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KCNC4Q03721 635 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MXD1Q05195 221 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 OLFML1Q6UWY5 402 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 P3H2Q8IVL5 708 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZCCHC9Q8N567 271 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATP6V0D2Q8N8Y2 350 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL6Q8WZ60 621 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KAT5Q92993 513 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 THOC3Q96J01 351 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NEDD4LQ96PU5 975 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 C14orf105Q9NVL8 296 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SCN3BQ9NY72 215 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MAGED1Q9Y5V3 778 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 LOC102724200A0A096LPH7 203 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 BCAS1O75363 584 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 QARSP47897 775 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PPP2R2AP63151 447 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATXN7L3Q14CW9 347 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 LDLRAP1Q5SW96 308 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZCCHC23Q6ZST2 131 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SMYD1Q8NB12 490 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 OR14C36Q8NHC7 312 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RNF145Q96MT1 663 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FBRSL1Q9HCM7 1045 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GIT1Q9Y2X7 761 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1B0GVT2 93 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 EPHX1P07099 455 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 KCNA3P22001 575 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CRATP43155 626 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 IDH2P48735 452 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 TFDP2Q14188 446 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CES5AQ6NT32 575 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SLC16A10Q8TF71 515 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 XPO6Q96QU8 1125 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGAP39Q9C0H5 1083 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 JPH1Q9HDC5 661 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 UGGT2Q9NYU1 1516 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PIP5K1BO14986 540 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 STAG3L1P0CL83 205 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 RPA2P15927 270 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GKP32189 559 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PTPN5P54829 565 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CSTF3Q12996 717 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MED21Q13503 144 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGAP19Q14CB8 494 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 C9orf135Q5VTT2 229 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 TCEAL6Q6IPX3 200 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CPNE8Q86YQ8 564 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 RCBTB1Q8NDN9 531 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PSD4Q8NDX1 1056 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 EXOSC8Q96B26 276 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FEM1BQ9UK73 627 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 UBOX5O94941 541 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 COX7A2P14406 83 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 VEGFAP15692 232 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 VCLP18206 1134 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PTPRAP18433 802 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GABRR2P28476 465 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ITGA8P53708 1063 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 COPZ1P61923 177 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 DLG4P78352 724 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms