RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GM2AP17900 193 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 NUDT1P36639 197 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 ARSEP51690 589 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 PFN3P60673 137 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 SGCGQ13326 291 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 C1orf61Q13536 156 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 CAMK2BQ13554 666 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 IHHQ14623 411 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.39■□□□□ 0.53
SHMT2-206ENST00000553529 NIPA2Q8N8Q9 360 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 PLA2G15Q8NCC3 412 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 CXorf40AQ8TE69 158 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 CASKIN2Q8WXE0 1202 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 BZW2Q9Y6E2 419 aaKnown RBP18.39■□□□□ 0.53
SHMT2-206ENST00000553529 FREM2Q5SZK8 3169 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 RFPL3O75679 317 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 C6P13671 934 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 HNRNPH3P31942 346 aaKnown RBP18.38■□□□□ 0.53
SHMT2-206ENST00000553529 HTR7P34969 479 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 SCNN1BP51168 640 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 CDH6P55285 790 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 IL10RBQ08334 325 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 CCDC15Q0P6D6 951 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 OVGP1Q12889 678 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 PIGHQ14442 188 aaPredicted RBP18.38■□□□□ 0.53
SHMT2-206ENST00000553529 UGP2Q16851 508 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 WSCD2Q2TBF2 565 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 VSTM4Q8IW00 320 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 ZNF548Q8NEK5 533 aaPredicted RBP18.38■□□□□ 0.53
SHMT2-206ENST00000553529 RAB7BQ96AH8 199 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 CPEB1Q9BZB8 566 aaKnown RBP18.38■□□□□ 0.53
SHMT2-206ENST00000553529 CTTNBP2NLQ9P2B4 639 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 DKK3Q9UBP4 350 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 IP6K2Q9UHH9 426 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 TFR2Q9UP52 801 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 HS3ST3A1Q9Y663 406 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 LRP4O75096 1905 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 MYLKQ15746 1914 aa18.38■□□□□ 0.53
SHMT2-206ENST00000553529 CACNA1BQ00975 2339 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 SPTY2D1-AS1A0A0U1RR47 76 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 TRAFD1O14545 582 aaPredicted RBP18.37■□□□□ 0.53
SHMT2-206ENST00000553529 RIOK3O14730 519 aaKnown RBP18.37■□□□□ 0.53
SHMT2-206ENST00000553529 FPGTO14772 594 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 MAFKO60675 156 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 GCATO75600 419 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 TM7SF2O76062 418 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 PCCBP05166 539 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 MMP12P39900 470 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 HCAR3P49019 387 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 LIG3P49916 1009 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 DPYSL3Q14195 570 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 LBRQ14739 615 aaKnown RBP18.37■□□□□ 0.53
SHMT2-206ENST00000553529 SMAD1Q15797 465 aaKnown RBP18.37■□□□□ 0.53
SHMT2-206ENST00000553529 DEFB133Q30KQ1 61 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 INAVAQ3KP66 663 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 TMEM52BQ4KMG9 183 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 HES3Q5TGS1 186 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 NCBP2-AS2Q69YL0 99 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 SPECC1LQ69YQ0 1117 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 TMCO3Q6UWJ1 677 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 OXR1Q8N573 874 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 PCDH19Q8TAB3 1148 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 LENG8Q96PV6 779 aaPredicted RBP18.37■□□□□ 0.53
SHMT2-206ENST00000553529 DNAJC7Q99615 494 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 ABHD10Q9NUJ1 306 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 HYOU1Q9Y4L1 999 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 OR1A2Q9Y585 309 aa18.37■□□□□ 0.53
SHMT2-206ENST00000553529 COL27A1Q8IZC6 1860 aaPredicted RBP18.37■□□□□ 0.53
SHMT2-206ENST00000553529 YKT6O15498 198 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 MAGEC1O60732 1142 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 ARL4AP40617 200 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 RAD51Q06609 339 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 TRAF2Q12933 501 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 KRT81Q14533 505 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 CRTC1Q6UUV9 634 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 B4GALNT4Q76KP1 1039 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 PARGQ86W56 976 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 PSTKQ8IV42 348 aaKnown RBP18.36■□□□□ 0.53
SHMT2-206ENST00000553529 SFTPA2Q8IWL1 248 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 OR4C6Q8NH72 309 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 LMX1AQ8TE12 382 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 ECHDC3Q96DC8 303 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 APOLD1Q96LR9 279 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 CELSR3Q9NYQ7 3312 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.36■□□□□ 0.53
SHMT2-206ENST00000553529 CFAP47Q6ZTR5 3102 aa18.36■□□□□ 0.53
SHMT2-206ENST00000553529 TRABD2BA6NFA1 517 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 EIF3CLB5ME19 914 aaKnown RBP18.35■□□□□ 0.53
SHMT2-206ENST00000553529 K7ESM1 405 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 MFAP3LO75121 409 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 CSF2P04141 144 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 NME1P15531 152 aaKnown RBP18.35■□□□□ 0.53
SHMT2-206ENST00000553529 JUNDP17535 347 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 CKMT2P17540 419 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 CR2P20023 1033 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 XPAP23025 273 aaPredicted RBP18.35■□□□□ 0.53
SHMT2-206ENST00000553529 RABIFP47224 123 aa18.35■□□□□ 0.53
SHMT2-206ENST00000553529 INSM1Q01101 510 aaPredicted RBP18.35■□□□□ 0.53
SHMT2-206ENST00000553529 CYP4F3Q08477 520 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms