RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ASAH2Q9NR71 780 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 NDRG3Q9UGV2 375 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 HAO1Q9UJM8 370 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 PCDHA12Q9UN75 941 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 FAM96BQ9Y3D0 163 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 A3GALT2U3KPV4 340 aa5.4□□□□□ -1.54
SYNE2-210ENST00000553455 ZMYM2Q9UBW7 1377 aa5.4□□□□□ -1.55
SYNE2-210ENST00000553455 FRMD3A2A2Y4 597 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 TTC36A6NLP5 189 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 A8MZ25 164 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 EIF3CLB5ME19 914 aaKnown RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 PTGES3LE9PB15 166 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 MDM4O15151 490 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 OR2C1O95371 312 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 MYZAPP0CAP1 466 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 PRR35P0CG20 571 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 PCNAP12004 261 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 PORP16435 677 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 SHMT1P34896 483 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 PPARGP37231 505 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 UBA7P41226 1012 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 PPP3CCP48454 512 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 HMGA2P52926 109 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 CAPSQ13938 189 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 ESCO2Q56NI9 601 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 CXorf66Q5JRM2 361 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 KLHL35Q6PF15 583 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 CPLX2Q6PUV4 134 aaKnown RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 TSSK4Q6SA08 328 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 DENND6AQ8IWF6 608 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 RPAP2Q8IXW5 612 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 ZNF333Q96JL9 665 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 WDR77Q9BQA1 342 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 NUDT16L1Q9BRJ7 211 aaKnown RBP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 FTOQ9C0B1 505 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNE2-210ENST00000553455 CCDC68Q9H2F9 335 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 COG5Q9UP83 839 aa5.39□□□□□ -1.55
SYNE2-210ENST00000553455 hCG_1807616A0A1W2PRN6 198 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 TYW5A2RUC4 315 aaKnown RBP5.38□□□□□ -1.55
SYNE2-210ENST00000553455 FAM90A8PA6NJQ4 464 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 STMND1H3BQB6 276 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 SEC14L5O43304 696 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 FIBPO43427 364 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 TIMM44O43615 452 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ATP2C2O75185 946 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 MMP3P08254 477 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 FAM90A13PP0C7W8 464 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 FAM90A24PP0C7X0 464 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 AGAP20933 346 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 KELP23276 732 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ACTN2P35609 894 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 AVPR1AP37288 418 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 PSMB10P40306 273 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 RAD52P43351 418 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 F2RL1P55085 397 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 SSBP2P81877 361 aaPredicted RBP5.38□□□□□ -1.55
SYNE2-210ENST00000553455 FAM27E3Q08E93 113 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 NIPAL4Q0D2K0 466 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 LAMB3Q13751 1172 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 LPIN1Q14693 890 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 PRAMEF19Q5SWL8 479 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 HIST2H2BCQ6DN03 193 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 HIST2H2BDQ6DRA6 164 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 NCAPH2Q6IBW4 605 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 LCTLQ6UWM7 567 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 QSOX2Q6ZRP7 698 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ENOSF1Q7L5Y1 443 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 RBFAQ8N0V3 343 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ENGASEQ8NFI3 743 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ZC3HAV1LQ96H79 300 aaKnown RBP5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ZFYVE19Q96K21 471 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 SERINC2Q96SA4 455 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 SIN3AQ96ST3 1273 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 MSTO1Q9BUK6 570 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 NPFFR1Q9GZQ6 430 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 CDT1Q9H211 546 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 KIF9Q9HAQ2 790 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 DDX4Q9NQI0 724 aaKnown RBP5.38□□□□□ -1.55
SYNE2-210ENST00000553455 ANKRD10Q9NXR5 420 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 FRMD4BQ9Y2L6 1034 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 LSM4Q9Y4Z0 139 aaKnown RBP5.38□□□□□ -1.55
SYNE2-210ENST00000553455 RAI2Q9Y5P3 530 aa5.38□□□□□ -1.55
SYNE2-210ENST00000553455 MYO1GB0I1T2 1018 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 IFNA2P01563 188 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 ENO3P13929 434 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-210ENST00000553455 CHRNB2P17787 502 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 INHBEP58166 350 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 SRSF4Q08170 494 aaKnown RBP5.37□□□□□ -1.55
SYNE2-210ENST00000553455 GOLGA8DPQ0D2H9 430 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 OLIG2Q13516 323 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 IRF3Q14653 427 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 WTAPQ15007 396 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 DUSP6Q16828 381 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 SOWAHAQ2M3V2 549 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 SGO1Q5FBB7 561 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 NUGGCQ68CJ6 796 aa5.37□□□□□ -1.55
SYNE2-210ENST00000553455 ZNF626Q68DY1 528 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms