RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 KNTC1P50748 2209 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 CSF2P04141 144 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 CDK4P11802 303 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 JUNDP17535 347 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 ACP1P24666 158 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 CASP14P31944 242 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 ARL4AP40617 200 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 ZNF135P52742 658 aaPredicted RBP16.04■□□□□ 0.16
CDK4-215ENST00000553237 IL10RBQ08334 325 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 EIF2B5Q13144 721 aaKnown RBP16.04■□□□□ 0.16
CDK4-215ENST00000553237 TARDBPQ13148 414 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK4-215ENST00000553237 PIGHQ14442 188 aaPredicted RBP16.04■□□□□ 0.16
CDK4-215ENST00000553237 GRM3Q14832 879 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 UGP2Q16851 508 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 TMEM52BQ4KMG9 183 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 HES3Q5TGS1 186 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 ALKBH5Q6P6C2 394 aaKnown RBP16.04■□□□□ 0.16
CDK4-215ENST00000553237 PARGQ86W56 976 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 ZSWIM9Q86XI8 627 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
CDK4-215ENST00000553237 ZNF641Q96N77 438 aaPredicted RBP16.04■□□□□ 0.16
CDK4-215ENST00000553237 C1QTNF7Q9BXJ2 289 aa16.04■□□□□ 0.16
CDK4-215ENST00000553237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK4-215ENST00000553237 TSPAN11A1L157 253 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 TTC24A2A3L6 582 aaPredicted RBP16.03■□□□□ 0.16
CDK4-215ENST00000553237 NEMP2A6NFY4 417 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 H3BM21 787 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 K7ESM1 405 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
CDK4-215ENST00000553237 SCAMP1O15126 338 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 MUSKO15146 869 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 CYP1A2P05177 515 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 ALPPL2P10696 532 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 NME1P15531 152 aaKnown RBP16.03■□□□□ 0.16
CDK4-215ENST00000553237 HNF1BP35680 557 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 SSR1P43307 286 aaKnown RBP16.03■□□□□ 0.16
CDK4-215ENST00000553237 SCNN1BP51168 640 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 SUOXP51687 545 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 THOP1P52888 689 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 ELP6Q0PNE2 266 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 ILKQ13418 452 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 POLNQ7Z5Q5 900 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 LZTR1Q8N653 840 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 PAF1Q8N7H5 531 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
CDK4-215ENST00000553237 ZNF548Q8NEK5 533 aaPredicted RBP16.03■□□□□ 0.16
CDK4-215ENST00000553237 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 APOLD1Q96LR9 279 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 CSPG4P5Q96PW8 444 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 TUBGCP5Q96RT8 1024 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 ATP13A3Q9H7F0 1226 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 NLGN3Q9NZ94 848 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 IP6K2Q9UHH9 426 aa16.03■□□□□ 0.16
CDK4-215ENST00000553237 ZZEF1O43149 2961 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 CHD6Q8TD26 2715 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 C6P13671 934 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 SERPINA4P29622 427 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 EIF4A3P38919 411 aaKnown RBP16.02■□□□□ 0.16
CDK4-215ENST00000553237 CSNK1DP48730 415 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 LIG3P49916 1009 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 INSM1Q01101 510 aaPredicted RBP16.02■□□□□ 0.16
CDK4-215ENST00000553237 BCL2L1Q07817 233 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 SLC10A7Q0GE19 358 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.16
CDK4-215ENST00000553237 IRF4Q15306 451 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 ERAP2Q6P179 960 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 BRAT1Q6PJG6 821 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 TMCO3Q6UWJ1 677 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 RBFAQ8N0V3 343 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 LMX1AQ8TE12 382 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 NSMCE3Q96MG7 304 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.16
CDK4-215ENST00000553237 PCDH18Q9HCL0 1135 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 PNMA8BQ9ULN7 279 aaPredicted RBP16.02■□□□□ 0.16
CDK4-215ENST00000553237 ATP8A1Q9Y2Q0 1164 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 RAXQ9Y2V3 346 aa16.02■□□□□ 0.16
CDK4-215ENST00000553237 WDFY3Q8IZQ1 3526 aa16.02■□□□□ 0.15
CDK4-215ENST00000553237 PKD1L2Q7Z442 2459 aa16.02■□□□□ 0.15
CDK4-215ENST00000553237 CFAP47Q6ZTR5 3102 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 DMXL2Q8TDJ6 3036 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 MYO1FO00160 1098 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 AQP9O43315 295 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 LZTS3O60299 673 aaPredicted RBP16.01■□□□□ 0.15
CDK4-215ENST00000553237 CKMT1AP12532 417 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 YPEL5P62699 121 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 SLC25A11Q02978 314 aaKnown RBP16.01■□□□□ 0.15
CDK4-215ENST00000553237 NSUN2Q08J23 767 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDK4-215ENST00000553237 MMRN1Q13201 1228 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 C1orf61Q13536 156 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 PTK2BQ14289 1009 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 KRT81Q14533 505 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 LBRQ14739 615 aaKnown RBP16.01■□□□□ 0.15
CDK4-215ENST00000553237 LRRC14Q15048 493 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 WSCD2Q2TBF2 565 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 DEFB133Q30KQ1 61 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 TMCO4Q5TGY1 634 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 SPECC1LQ69YQ0 1117 aa16.01■□□□□ 0.15
CDK4-215ENST00000553237 C19orf48Q6RUI8 117 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms