RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SEMG2Q02383 582 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 IL10RBQ08334 325 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 RALGDSQ12967 914 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 TMEM52BQ4KMG9 183 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 CCDC157Q569K6 752 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 TTC7BQ86TV6 843 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 CAMK1DQ8IU85 385 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 TEKT4Q8WW24 435 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 HSPH1Q92598 858 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 WRAP53Q9BUR4 548 aaKnown RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 SUV39H2Q9H5I1 410 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 ZWILCHQ9H900 591 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 PCDH12Q9NPG4 1184 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 IPO11Q9UI26 975 aaKnown RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 COQ6Q9Y2Z9 468 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 PCDHGA1Q9Y5H4 931 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
NPAS3-209ENST00000551008 TTC24A2A3L6 582 aaPredicted RBP13.15□□□□□ -0.3
NPAS3-209ENST00000551008 H3BRJ5 948 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 DFFAO00273 331 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 TRAFD1O14545 582 aaPredicted RBP13.15□□□□□ -0.3
NPAS3-209ENST00000551008 MAFKO60675 156 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 NEBLO76041 1014 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 MYF5P13349 255 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 NME1P15531 152 aaKnown RBP13.15□□□□□ -0.3
NPAS3-209ENST00000551008 DESP17661 470 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 MMP12P39900 470 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 ZNF135P52742 658 aaPredicted RBP13.15□□□□□ -0.3
NPAS3-209ENST00000551008 TAS2R40P59535 323 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 SLC10A7Q0GE19 358 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
NPAS3-209ENST00000551008 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 KCTD16Q68DU8 428 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 SRLQ86TD4 932 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 ZSCAN30Q86W11 494 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 OR4C6Q8NH72 309 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 IFT43Q96FT9 208 aa13.15□□□□□ -0.3
NPAS3-209ENST00000551008 NEMP1O14524 444 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
NPAS3-209ENST00000551008 FFAR2O15552 330 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 DAPK3O43293 454 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 RFPL3O75679 317 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 PALMO75781 387 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 CSF2P04141 144 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 PTMSP20962 102 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 ACP1P24666 158 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 RABIFP47224 123 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 RAD51Q06609 339 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 ZNF211Q13398 564 aaPredicted RBP13.14□□□□□ -0.31
NPAS3-209ENST00000551008 IHHQ14623 411 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 IRF4Q15306 451 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 UGP2Q16851 508 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 WSCD2Q2TBF2 565 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 BOLA3Q53S33 107 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 PARGQ86W56 976 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 PROSER1Q86XN7 944 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 RBFAQ8N0V3 343 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 ZNF548Q8NEK5 533 aaPredicted RBP13.14□□□□□ -0.31
NPAS3-209ENST00000551008 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
NPAS3-209ENST00000551008 HCAR2Q8TDS4 363 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 PSKH2Q96QS6 385 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 TUBGCP5Q96RT8 1024 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 CHP1Q99653 195 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 NCAPGQ9BPX3 1015 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 SP110Q9HB58 689 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 DNAJC28Q9NX36 388 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 IP6K2Q9UHH9 426 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 RALYQ9UKM9 306 aaKnown RBP13.14□□□□□ -0.31
NPAS3-209ENST00000551008 NBEAQ8NFP9 2946 aa13.14□□□□□ -0.31
NPAS3-209ENST00000551008 FPGTO14772 594 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 MFSD11O43934 449 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 TM7SF2O76062 418 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 C6P13671 934 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 CKMT2P17540 419 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 SGCGQ13326 291 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 PDE1CQ14123 709 aaPredicted RBP13.13□□□□□ -0.31
NPAS3-209ENST00000551008 DPYSL3Q14195 570 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 RFTN1Q14699 578 aaPredicted RBP13.13□□□□□ -0.31
NPAS3-209ENST00000551008 LBRQ14739 615 aaKnown RBP13.13□□□□□ -0.31
NPAS3-209ENST00000551008 AGERQ15109 404 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 SPECC1LQ69YQ0 1117 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 DCP2Q8IU60 420 aaKnown RBP13.13□□□□□ -0.31
NPAS3-209ENST00000551008 PELI3Q8N2H9 469 aa13.13□□□□□ -0.31
NPAS3-209ENST00000551008 LZTR1Q8N653 840 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms