RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ZNF212Q9UDV6 495 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 PLAAQ9Y263 795 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 C2CD3Q4AC94 2353 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 A0A0D9SEW6 157 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 SMTNL1A8MU46 457 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 GOLGA8SH3BPF8 625 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 K7ERQ8 282 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 KPNA3O00505 521 aaPredicted RBP12.37□□□□□ -0.43
DDX54-206ENST00000549271 SPINT1O43278 529 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 ZNF821O75541 412 aaPredicted RBP12.37□□□□□ -0.43
DDX54-206ENST00000549271 GCATO75600 419 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 ZMPSTE24O75844 475 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 UNGP13051 313 aaPredicted RBP12.37□□□□□ -0.43
DDX54-206ENST00000549271 MMP8P22894 467 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 RRM1P23921 792 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 FLT3P36888 993 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 RABIFP47224 123 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 CD97P48960 835 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 SULT1E1P49888 294 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 ZNF165P49910 485 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 DEUP1Q05D60 604 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PTP4A2Q12974 167 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 EIF2B5Q13144 721 aaKnown RBP12.37□□□□□ -0.43
DDX54-206ENST00000549271 FGL2Q14314 439 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 KLHL40Q2TBA0 621 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 TPRG1LQ5T0D9 272 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 FAM102AQ5T9C2 384 aaPredicted RBP12.37□□□□□ -0.43
DDX54-206ENST00000549271 RETSATQ6NUM9 610 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 CHST14Q8NCH0 376 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 MIB2Q96AX9 1013 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PPP1R16AQ96I34 528 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 TBCBQ99426 244 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 FOXP3Q9BZS1 431 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 SYNDIG1Q9H7V2 258 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 DYRK4Q9NR20 520 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PISDQ9UG56 409 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 IL36AQ9UHA7 158 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 WASF2Q9Y6W5 498 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 CHD5Q8TDI0 1954 aa12.37□□□□□ -0.43
DDX54-206ENST00000549271 A0A1W2PQC6 194 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 LMO7DNF2Z398 122 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 RNF103O00237 685 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 RAD51BO15315 384 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 AP1G1O43747 822 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 BNIP3LO60238 219 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 ENDOD1O94919 500 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 PCDH8O95206 1070 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 JMJD7P0C870 316 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 ITIH1P19827 911 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 OR1E1P30953 314 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 RECQLP46063 649 aaPredicted RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 SERPINH1P50454 418 aaKnown RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 ARSIQ5FYB1 569 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 KIAA1161Q6NSJ0 714 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 DPY19L3Q6ZPD9 716 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 IRF2BP2Q7Z5L9 587 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 RBFAQ8N0V3 343 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 PCDH20Q8N6Y1 951 aaKnown RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 BTN2A2Q8WVV5 523 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 TBATAQ96M53 351 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 NAP1L5Q96NT1 182 aaPredicted RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 GFM1Q96RP9 751 aaKnown RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 SLC17A9Q9BYT1 436 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 TMPRSS4Q9NRS4 437 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 MPP6Q9NZW5 540 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 PPARGC1AQ9UBK2 798 aaKnown RBP12.36□□□□□ -0.43
DDX54-206ENST00000549271 SPASTQ9UBP0 616 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 LOXL2Q9Y4K0 774 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 PCDHB11Q9Y5F2 797 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 SNX10Q9Y5X0 201 aa12.36□□□□□ -0.43
DDX54-206ENST00000549271 A0A1W2PQM1 296 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 SYCE3A1L190 88 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 C9orf172C9J069 976 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 LEFTY1O75610 366 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 ITGB7P26010 798 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 CD82P27701 267 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 L1CAMP32004 1257 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 ETV5P41161 510 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 NEK3P51956 506 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 ADKP55263 362 aaKnown RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 RPS21P63220 83 aaKnown RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 CCL7P80098 99 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 NRG1Q02297 640 aaPredicted RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 PDE1CQ14123 709 aaPredicted RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 CLEC16AQ2KHT3 1053 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 RAB6CQ53S08 254 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 LINGO4Q6UY18 593 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 TRIM72Q6ZMU5 477 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms