RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 CAPSQ13938 189 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 DHX8Q14562 1220 aaKnown RBP4.73□□□□□ -1.65
MDM2-228ENST00000542502 LPIN1Q14693 890 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 KHDC1Q4VXA5 237 aaKnown RBP4.73□□□□□ -1.65
MDM2-228ENST00000542502 COBLL1Q53SF7 1204 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 SPECC1Q5M775 1068 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 SYCP2LQ5T4T6 812 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TWF2Q6IBS0 349 aaKnown RBP4.73□□□□□ -1.65
MDM2-228ENST00000542502 USP49Q70CQ1 688 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 ZNF720Q7Z2F6 126 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TECPR1Q7Z6L1 1165 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 DEFB128Q7Z7B8 93 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TTC7BQ86TV6 843 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 CD302Q8IX05 232 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TDHQ8IZJ6 230 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 SYCP3Q8IZU3 236 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TMEM161BQ8NDZ6 487 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 ENGASEQ8NFI3 743 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 DBF4BQ8NFT6 615 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 PJA1Q8NG27 643 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 URGCPQ8TCY9 931 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 SMARCE1Q969G3 411 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TTC17Q96AE7 1141 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 DNAJC19Q96DA6 116 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 BICD1Q96G01 975 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 PAGE5Q96GU1 130 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 PLIN2Q99541 437 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 CGRRF1Q99675 332 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TCHPQ9BT92 498 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 WACQ9BTA9 647 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 MRPL9Q9BYD2 267 aaKnown RBP4.73□□□□□ -1.65
MDM2-228ENST00000542502 PANK2Q9BZ23 570 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 SIK2Q9H0K1 926 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 ZHX3Q9H4I2 956 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 ERVK-5Q9HDB9 667 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 XPNPEP1Q9NQW7 623 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 MRPS18AQ9NVS2 196 aaKnown RBP4.73□□□□□ -1.65
MDM2-228ENST00000542502 TMEM161AQ9NX61 479 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 ZMYND8Q9ULU4 1186 aaPredicted RBP4.73□□□□□ -1.65
MDM2-228ENST00000542502 TBX20Q9UMR3 447 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TNFSF13BQ9Y275 285 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 PCDHB7Q9Y5E2 793 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TRIOBPQ9H2D6 2365 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TTC3P53804 2025 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 MICAL3Q7RTP6 2002 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 TRANK1O15050 2925 aa4.73□□□□□ -1.65
MDM2-228ENST00000542502 RANBP2P49792 3224 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 BICDL2A1A5D9 508 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 ARHGEF37A1IGU5 675 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 FSD2A1L4K1 749 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 TMEM150BA6NC51 233 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 MYMKA6NI61 221 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 PRSS29PA6NIE9 313 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 FAM227AF5H4B4 570 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 H0YIZ8 118 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 K7ENM7 598 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 PDXKO00764 312 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 PSMA7O14818 248 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 HNRNPDLO14979 420 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 SLC16A4O15374 487 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 CALUO43852 315 aaPredicted RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 NBNO60934 754 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 GCNT3O95395 438 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 NTN1O95631 604 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 ZBED1O96006 694 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 HRGP04196 525 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 RPN1P04843 607 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 CLTAP09496 248 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 CD52P31358 61 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 MATR3P43243 847 aaKnown RBP eCLIP4.72□□□□□ -1.65
MDM2-228ENST00000542502 MAP2K6P52564 334 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 LRRC63Q05C16 580 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 ENPEPQ07075 957 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 LRIT3Q3SXY7 679 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 L1TD1Q5T7N2 865 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 ZNF658Q5TYW1 1059 aaPredicted RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 ATF7IP2Q5U623 682 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 AWAT2Q6E213 333 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 PPP4R4Q6NUP7 873 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 SLC2A7Q6PXP3 512 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 CRELD2Q6UXH1 353 aaPredicted RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 ZNF517Q6ZMY9 492 aaPredicted RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 MAEAQ7L5Y9 396 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 WDR53Q7Z5U6 358 aaPredicted RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 MRPL10Q7Z7H8 261 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 FAM228AQ86W67 206 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 MYOCDQ8IZQ8 938 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 DAW1Q8N136 415 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 GUF1Q8N442 669 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 MLKLQ8NB16 471 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 SPATA20Q8TB22 786 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 TOP1MTQ969P6 601 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 RGMAQ96B86 450 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 NELL2Q99435 816 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 RAD9AQ99638 391 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 TSG101Q99816 390 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 CCDC94Q9BW85 323 aaPredicted RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 PRSS22Q9GZN4 317 aa4.72□□□□□ -1.65
MDM2-228ENST00000542502 NAT10Q9H0A0 1025 aaKnown RBP4.72□□□□□ -1.65
MDM2-228ENST00000542502 ZNF700Q9H0M5 742 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms