RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ATL2Q8NHH9 583 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 HCAR2Q8TDS4 363 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 ARHGAP9Q9BRR9 750 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 LRRN3Q9H3W5 708 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 DNAI1Q9UI46 699 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 A0A1W2PQM1 296 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 GOLGA8SH3BPF8 625 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 RPLP0P05388 317 aaKnown RBP27.09■■□□□ 1.93
CHFR-218ENST00000540963 CELA2BP08218 269 aaPredicted RBP27.09■■□□□ 1.93
CHFR-218ENST00000540963 JMJD7P0C870 316 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 MTIF2P46199 727 aaKnown RBP27.09■■□□□ 1.93
CHFR-218ENST00000540963 CCL7P80098 99 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 LRRC14Q15048 493 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 IRF4Q15306 451 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 ALG11Q2TAA5 492 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 RWDD4Q6NW29 188 aaKnown RBP27.09■■□□□ 1.93
CHFR-218ENST00000540963 HID1Q8IV36 788 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 CPEB1Q9BZB8 566 aaKnown RBP27.09■■□□□ 1.93
CHFR-218ENST00000540963 APPL1Q9UKG1 709 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 GPR34Q9UPC5 381 aa27.09■■□□□ 1.93
CHFR-218ENST00000540963 UBR5O95071 2799 aaPredicted RBP27.09■■□□□ 1.93
CHFR-218ENST00000540963 TERTO14746 1132 aaKnown RBP27.08■■□□□ 1.93
CHFR-218ENST00000540963 IGSF6O95976 241 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 TIMP2P16035 220 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 PNLIPP16233 465 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 ATP11AP98196 1134 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 NFATC4Q14934 902 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 AGERQ15109 404 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 MAN2A1Q16706 1144 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 ATXN7L2Q5T6C5 722 aaPredicted RBP27.08■■□□□ 1.93
CHFR-218ENST00000540963 ATG14Q6ZNE5 492 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 TBC1D31Q96DN5 1066 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 FOXP3Q9BZS1 431 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 SIRPGQ9P1W8 387 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 NEU3Q9UQ49 428 aa27.08■■□□□ 1.93
CHFR-218ENST00000540963 TMCC1O94876 653 aa27.07■■□□□ 1.92
CHFR-218ENST00000540963 ZFP36L1Q07352 338 aaKnown RBP27.07■■□□□ 1.92
CHFR-218ENST00000540963 DPY19L2P1Q6NXN4 242 aa27.07■■□□□ 1.92
CHFR-218ENST00000540963 GPR156Q8NFN8 814 aa27.07■■□□□ 1.92
CHFR-218ENST00000540963 TSACCQ96A04 125 aaPredicted RBP27.07■■□□□ 1.92
CHFR-218ENST00000540963 WRAP53Q9BUR4 548 aaKnown RBP27.07■■□□□ 1.92
CHFR-218ENST00000540963 B3GNT4Q9C0J1 378 aa27.07■■□□□ 1.92
CHFR-218ENST00000540963 TLN1Q9Y490 2541 aaKnown RBP27.06■■□□□ 1.92
CHFR-218ENST00000540963 BUB1O43683 1085 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 LRIG2O94898 1065 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 ITGB6P18564 788 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 SRP54P61011 504 aaKnown RBP27.06■■□□□ 1.92
CHFR-218ENST00000540963 NOMO3P69849 1222 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 GRM3Q14832 879 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 TGIF1Q15583 401 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 WSCD2Q2TBF2 565 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 C2CD6Q53TS8 623 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 LRRC73Q5JTD7 316 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 STRADAQ7RTN6 431 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 ZSCAN1Q8NBB4 408 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 EXTL1Q92935 676 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 RBM15Q96T37 977 aaKnown RBP eCLIP27.06■■□□□ 1.92
CHFR-218ENST00000540963 APOOQ9BUR5 198 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 LOXL2Q9Y4K0 774 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 DGKBQ9Y6T7 804 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 PTPN13Q12923 2485 aa27.06■■□□□ 1.92
CHFR-218ENST00000540963 KRT10P13645 584 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 GLB1P16278 677 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 XPAP23025 273 aaPredicted RBP27.05■■□□□ 1.92
CHFR-218ENST00000540963 CD82P27701 267 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 SDC4P31431 198 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 RAPGEF1Q13905 1077 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 ENPP7Q6UWV6 458 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 CCNJLQ8IV13 435 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 NDST4Q9H3R1 872 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 METTL5Q9NRN9 209 aaKnown RBP27.05■■□□□ 1.92
CHFR-218ENST00000540963 WDR70Q9NW82 654 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 KIAA1468Q9P260 1216 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 PISDQ9UG56 409 aa27.05■■□□□ 1.92
CHFR-218ENST00000540963 BSNQ9UPA5 3926 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 FAM72CH0Y354 149 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 SUV39H1O43463 412 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 PLEKP08567 350 aaPredicted RBP27.04■■□□□ 1.92
CHFR-218ENST00000540963 HGFP14210 728 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 PTPN9P43378 593 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 MANEAQ5SRI9 462 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 FAM72AQ5TYM5 149 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 TAF3Q5VWG9 929 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 FAM72DQ6L9T8 149 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 OGFOD3Q6PK18 319 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 FAM72BQ86X60 149 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 FAM114A1Q8IWE2 563 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 EMC1Q8N766 993 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 CPA5Q8WXQ8 436 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 WDR92Q96MX6 357 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 CMKLR1Q99788 373 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 KLQ9UEF7 1012 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 PCDHB11Q9Y5F2 797 aa27.04■■□□□ 1.92
CHFR-218ENST00000540963 A0A1W2PQC6 194 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 TSPAN11A1L157 253 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 TNFP01375 233 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 ITIH2P19823 946 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 YBEYP58557 167 aaPredicted RBP27.03■■□□□ 1.92
CHFR-218ENST00000540963 RHOAP61586 193 aa27.03■■□□□ 1.92
CHFR-218ENST00000540963 MTM1Q13496 603 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms