RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ACSL4O60488 711 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 NPHS1O60500 1241 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 KRT36O76013 467 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 SNUPNO95149 360 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 EFEMP2O95967 443 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 RPSAP08865 295 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ETFBP38117 255 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 PTDSS1P48651 473 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 DNAJB13P59910 316 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MXRA7P84157 204 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ACVR1Q04771 509 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 RCN1Q15293 331 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ALG1LQ6GMV1 187 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC8B1Q6J4K2 584 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 POU5F2Q8N7G0 328 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 PEX13Q92968 403 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MOCOSQ96EN8 888 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 TSPAN17Q96FV3 270 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 FEM1CQ96JP0 617 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF570Q96NI8 536 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 OR52B2Q96RD2 323 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 OLFM1Q99784 485 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 SEMA3CQ99985 751 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 TCF7L2Q9NQB0 619 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 STX18Q9P2W9 335 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC7A8Q9UHI5 535 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MIA3Q5JRA6 1907 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 A0A088AWK7 358 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MUSKO15146 869 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ADAM12O43184 909 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 CIB2O75838 187 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 S1PR4O95977 384 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 HLA-DPA1P20036 260 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ATP5F1P24539 256 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ATP5C1P36542 298 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 CCR10P46092 362 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ARSDP51689 593 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ACTR3P61158 418 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 KLF10Q13118 480 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 LAMB3Q13751 1172 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 FAM83EQ2M2I3 478 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 SEL1L3Q68CR1 1132 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 SPATA6LQ8N4H0 392 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 OVCA2Q8WZ82 227 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 HDAC10Q969S8 669 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 CLPTM1LQ96KA5 538 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MAGEH1Q9H213 219 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 MTRRQ9UBK8 725 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ZDHHC2Q9UIJ5 367 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 E9PBE3 544 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 DCXO43602 365 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 KLHL41O60662 606 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 FGF1P05230 155 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 HOXD9P28356 352 aaPredicted RBP11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC6A4P31645 630 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 SERPINB5P36952 375 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 TUFMP49411 452 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC25A3Q00325 362 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC34A1Q06495 639 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 C6orf163Q5TEZ5 329 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 AGAP9Q5VTM2 703 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 KLHDC10Q6PID8 442 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 PIWIL4Q7Z3Z4 852 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 PTAR1Q7Z6K3 402 aaPredicted RBP11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 LRRC43Q8N309 656 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 TXNDC5Q8NBS9 432 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 PDZD8Q8NEN9 1154 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 GIMAP7Q8NHV1 300 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 STMN2Q93045 179 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 CNDP1Q96KN2 507 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 UBXN10Q96LJ8 280 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 PANX3Q96QZ0 392 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 NDNQ99608 321 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 ACSS2Q9NR19 701 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 RIMKLBQ9ULI2 386 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 VWA7Q9Y334 891 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 BACE2Q9Y5Z0 518 aa11.49□□□□□ -0.57
SLC28A1-204ENST00000538177 MEI4A8MW99 385 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 H3BNC9 293 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 WISP3O95389 354 aaPredicted RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CXCL10P02778 98 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 LTA4HP09960 611 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 COX4I1P13073 169 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CDH4P55283 916 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 PRMT2P55345 433 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 PRAMEP78395 509 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 PFKPQ01813 784 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 BTKQ06187 659 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 NSUN2Q08J23 767 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CSHL1Q14406 222 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF235Q14590 738 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CCDC6Q16204 474 aa11.48□□□□□ -0.57
SLC28A1-204ENST00000538177 CMPK2Q5EBM0 449 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms