RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 MYBPHLA2RUH7 354 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 KRT87PA6NCN2 255 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 COX7A2P14406 83 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 FBXO30Q8TB52 745 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 ARL8BQ9NVJ2 186 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 MTF2Q9Y483 593 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-205ENST00000533464 PSMB9P28065 219 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 ATP6V0D1P61421 351 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 TRIM16LQ309B1 348 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 CLNKQ7Z7G1 428 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 ADAMTSL2Q86TH1 951 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 TMEM192Q8IY95 271 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 NMUR2Q9GZQ4 415 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 TMEM245Q9H330 911 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 C5orf60A6NFR6 353 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 AZIN1O14977 448 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 PEX1O43933 1283 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 GPRIN3Q6ZVF9 776 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 ULK2Q8IYT8 1036 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 CLYBLQ8N0X4 340 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 PIK3R5Q8WYR1 880 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 MFSD3Q96ES6 412 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 WDR55Q9H6Y2 383 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-205ENST00000533464 NEDD8Q15843 81 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 FAM187BQ17R55 369 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 PPM1JQ5JR12 505 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 PCDH19Q8TAB3 1148 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 SYT17Q9BSW7 474 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 ADPRHL2Q9NX46 363 aa17.66■□□□□ 0.42
PHRF1-205ENST00000533464 KCNH1O95259 989 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 AP2A1O95782 977 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 NTRK1P04629 796 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 SP2Q02086 613 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 KCNA10Q16322 511 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CCDC142Q17RM4 750 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 OR6K2Q8NGY2 324 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 SNRNP27Q8WVK2 155 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 TRAPPC9Q96Q05 1148 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 RGPD8O14715 1765 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 C2orf71A6NGG8 1288 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 SLC9A3R1O14745 358 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 PIK3R1P27986 724 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 MC4RP32245 332 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 GDF10P55107 478 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 RPS7P62081 194 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 SH3PXD2AQ5TCZ1 1133 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 DRICH1Q6PGQ1 229 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 ECHDC2Q86YB7 292 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 ZNF567Q8N184 647 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 TLCD1Q96CP7 247 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 LEF1Q9UJU2 399 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 SNX6Q9UNH7 406 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CARNS1A5YM72 827 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 PTGES3LE9PB15 166 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 ZBTB48P10074 688 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 MAPKAPK3Q16644 382 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 NOL9Q5SY16 702 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 MARK2Q7KZI7 788 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CCDC3Q9BQI4 270 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 TSEN34Q9BSV6 310 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 EPS8L2Q9H6S3 715 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 COPG2Q9UBF2 871 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 STK39Q9UEW8 545 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 GRK4P32298 578 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CYP1B1Q16678 543 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CYP2A13Q16696 494 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 PPP1R15BQ5SWA1 713 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 RHBDF2Q6PJF5 856 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 LINGO1Q96FE5 620 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CYLDQ9NQC7 956 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 KLHL28Q9NXS3 571 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 GCATO75600 419 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 SNUPNO95149 360 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 EPN2O95208 641 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 RPN2P04844 631 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 GPD2P43304 727 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 INSCQ1MX18 579 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 CAMK1DQ8IU85 385 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 ACBD6Q9BR61 282 aa17.65■□□□□ 0.42
PHRF1-205ENST00000533464 HBS1LQ9Y450 684 aaKnown RBP17.65■□□□□ 0.42
PHRF1-205ENST00000533464 FAM220BPB1ANY3 271 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 E9PAM4 449 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 LINC00032P0C843 101 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ANPEPP15144 967 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 CREB1P16220 341 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 CENPAP49450 140 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ATXN1P54253 815 aaKnown RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 PRKG2Q13237 762 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 DHDDSQ86SQ9 333 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 KRT78Q8N1N4 520 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 FBXW8Q8N3Y1 598 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ZNF276Q8N554 614 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 SPATA22Q8NHS9 363 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 C1orf50Q9BV19 199 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 RIBC2Q9H4K1 309 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ZNHIT2Q9UHR6 403 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ZNF536O15090 1300 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 ARL5CA6NH57 179 aa17.64■□□□□ 0.41
PHRF1-205ENST00000533464 SHOX2O60902 331 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-205ENST00000533464 CNSTQ6PJW8 725 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms