RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 NBEAQ8NFP9 2946 aa19.14■□□□□ 0.66
SSH3-209ENST00000532600 NEMP1O14524 444 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 MUSKO15146 869 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 NEBLO76041 1014 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 RNF8O76064 485 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 CSF2P04141 144 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 RABIFP47224 123 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 CYP4F3Q08477 520 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 PDE1CQ14123 709 aaPredicted RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 SLC18A3Q16572 532 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 TSR1Q2NL82 804 aaKnown RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 TMEM52BQ4KMG9 183 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 PPP6R3Q5H9R7 873 aaPredicted RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 HES3Q5TGS1 186 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 DCP2Q8IU60 420 aaKnown RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 PSTKQ8IV42 348 aaKnown RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 TP53I13Q8NBR0 393 aaPredicted RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 TSEN2Q8NCE0 465 aaKnown RBP19.14■□□□□ 0.65
SSH3-209ENST00000532600 DENND6BQ8NEG7 585 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 SPTLC3Q9NUV7 552 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 ETNK2Q9NVF9 386 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 IMPACTQ9P2X3 320 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 SCINQ9Y6U3 715 aa19.14■□□□□ 0.65
SSH3-209ENST00000532600 KNTC1P50748 2209 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ACACAQ13085 2346 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 FPGTO14772 594 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 PRPSAP2O60256 369 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 MYBL1P10243 752 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 NME1P15531 152 aaKnown RBP19.13■□□□□ 0.65
SSH3-209ENST00000532600 DESP17661 470 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 PCK1P35558 622 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 HCAR3P49019 387 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 INSM1Q01101 510 aaPredicted RBP19.13■□□□□ 0.65
SSH3-209ENST00000532600 RAD51Q06609 339 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ILKQ13418 452 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 CCDC122Q5T0U0 273 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ALKBH5Q6P6C2 394 aaKnown RBP19.13■□□□□ 0.65
SSH3-209ENST00000532600 VPS36Q86VN1 386 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 PARGQ86W56 976 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 CAMK1DQ8IU85 385 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 TMEM139Q8IV31 216 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ZNF548Q8NEK5 533 aaPredicted RBP19.13■□□□□ 0.65
SSH3-209ENST00000532600 RFFLQ8WZ73 363 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ARHGEF26Q96DR7 871 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 TRIM11Q96F44 468 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 BTBD6Q96KE9 485 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 WRAP53Q9BUR4 548 aaKnown RBP19.13■□□□□ 0.65
SSH3-209ENST00000532600 PACSIN1Q9BY11 444 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 THAP2Q9H0W7 228 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 TCEAL2Q9H3H9 227 aaPredicted RBP19.13■□□□□ 0.65
SSH3-209ENST00000532600 SUV39H2Q9H5I1 410 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 RAXQ9Y2V3 346 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 COQ6Q9Y2Z9 468 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 GPSM3Q9Y4H4 160 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ANKRD36A6QL64 1941 aa19.13■□□□□ 0.65
SSH3-209ENST00000532600 ARHGAP42A6NI28 874 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 K7ESM1 405 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 SCAMP1O15126 338 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 PRKCGP05129 697 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 SEMG2Q02383 582 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 TARDBPQ13148 414 aaKnown RBP eCLIP19.12■□□□□ 0.65
SSH3-209ENST00000532600 DPYSL2Q16555 572 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 SMTNL2Q2TAL5 461 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 NYAP1Q6ZVC0 841 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 PDCD7Q8N8D1 485 aaKnown RBP19.12■□□□□ 0.65
SSH3-209ENST00000532600 HCAR2Q8TDS4 363 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 PCDH12Q9NPG4 1184 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 NLGN3Q9NZ94 848 aa19.12■□□□□ 0.65
SSH3-209ENST00000532600 COL27A1Q8IZC6 1860 aaPredicted RBP19.11■□□□□ 0.65
SSH3-209ENST00000532600 SOWAHDA6NJG2 315 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 DFFAO00273 331 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 DAPK3O43293 454 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 TM7SF2O76062 418 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 PEX11BO96011 259 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 CDK4P11802 303 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 CKMT1AP12532 417 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 JUPP14923 745 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 CSNK1DP48730 415 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 IRF4Q15306 451 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 UGP2Q16851 508 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 POLNQ7Z5Q5 900 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 SRLQ86TD4 932 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 RBFAQ8N0V3 343 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 CXorf40AQ8TE69 158 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 APOLD1Q96LR9 279 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 CCDC42Q96M95 316 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 MRPL47Q9HD33 250 aaKnown RBP19.11■□□□□ 0.65
SSH3-209ENST00000532600 ADAMTS20P59510 1910 aa19.11■□□□□ 0.65
SSH3-209ENST00000532600 RIOK3O14730 519 aaKnown RBP19.1■□□□□ 0.65
SSH3-209ENST00000532600 AKR1B10O60218 316 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 PALMO75781 387 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 CYP1A2P05177 515 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 RARAP10276 462 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 AMPD1P23109 780 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 MMP12P39900 470 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 HNRNPKP61978 463 aaKnown RBP eCLIP19.1■□□□□ 0.65
SSH3-209ENST00000532600 SLC25A11Q02978 314 aaKnown RBP19.1■□□□□ 0.65
SSH3-209ENST00000532600 IL10RBQ08334 325 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 WSCD2Q2TBF2 565 aa19.1■□□□□ 0.65
SSH3-209ENST00000532600 RAD9BQ6WBX8 426 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms