RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TTC7AQ9ULT0 858 aaPredicted RBP15.44■□□□□ 0.06
CCS-206ENST00000530961 PCDHGA5Q9Y5G8 931 aa15.44■□□□□ 0.06
CCS-206ENST00000530961 UNC79Q9P2D8 2635 aa15.44■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3DA0A087WVF3 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3IA0A087WXS9 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3EA0A087X179 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3KA0A087X1G2 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3FA6NER0 549 aaPredicted RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 FAM47DPA6NHR8 397 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3LB9A6J9 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 PLK4O00444 970 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 CES2O00748 559 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 FGGP02679 453 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 SERPINF2P08697 491 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3HP0C7X1 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TIMP2P16035 220 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 PRLRP16471 622 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TCP1P17987 556 aaKnown RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 CA4P22748 312 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 XPAP23025 273 aaPredicted RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 RBL1P28749 1068 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 STIP1P31948 543 aaKnown RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 CXCR5P32302 372 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 UGP2Q16851 508 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 LONRF2Q1L5Z9 754 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 WDR45BQ5MNZ6 344 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 LYSMD4Q5XG99 296 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3GQ6DHY5 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3CQ6IPX1 549 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 B4GALNT4Q76KP1 1039 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 ZSCAN30Q86W11 494 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 TBC1D3Q8IZP1 549 aaPredicted RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 RASGEF1CQ8N431 466 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 HOMER3Q9NSC5 361 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 KLHL8Q9P2G9 620 aaPredicted RBP15.43■□□□□ 0.06
CCS-206ENST00000530961 SNX12Q9UMY4 172 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 PCDHGC4Q9Y5F7 938 aa15.43■□□□□ 0.06
CCS-206ENST00000530961 MUC22E2RYF6 1773 aaPredicted RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 TTC24A2A3L6 582 aaPredicted RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 CFAP69A5D8W1 941 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 C10orf142B7Z368 130 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 TSPAN6O43657 245 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 GJB3O75712 270 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 RETP07949 1114 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 NFKBIAP25963 317 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 NUDT1P36639 197 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 DHPSP49366 369 aaPredicted RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 CCR5P51681 352 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 TAS2R38P59533 333 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 DSC2Q02487 901 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 NIPAL4Q0D2K0 466 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 SLC14A2Q15849 920 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 CCNG2Q16589 344 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 LPAL2Q16609 132 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 KIAA0895LQ68EN5 471 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 DRICH1Q6PGQ1 229 aaPredicted RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 PID1Q7Z2X4 250 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 SLC41A1Q8IVJ1 513 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 PAF1Q8N7H5 531 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 DNASE2BQ8WZ79 361 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 IMP4Q96G21 291 aaKnown RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 FEM1CQ96JP0 617 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 NSMCE3Q96MG7 304 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 HSPA12BQ96MM6 686 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 OSBPL9Q96SU4 736 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 FAM118BQ9BPY3 351 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 CEP41Q9BYV8 373 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 C6orf106Q9H6K1 298 aaPredicted RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 GLOD4Q9HC38 313 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 GMEB2Q9UKD1 530 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 R3HDM2Q9Y2K5 976 aaKnown RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.42■□□□□ 0.06
CCS-206ENST00000530961 RAI2Q9Y5P3 530 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 FADS3Q9Y5Q0 445 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 MIA3Q5JRA6 1907 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 CEP295Q9C0D2 2601 aa15.42■□□□□ 0.06
CCS-206ENST00000530961 ASPMQ8IZT6 3477 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 CTAGE9A4FU28 777 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 UPK3BL1B0FP48 263 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 UPK3BL2E5RIL1 263 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 NEMP1O14524 444 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 AREL1O15033 823 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 KCNN4O15554 427 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 LIASO43766 372 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 PGLSO95336 258 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 PROS1P07225 676 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 HOXD12P35452 270 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 PTGER3P43115 390 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 RPL26P61254 145 aaKnown RBP15.41■□□□□ 0.06
CCS-206ENST00000530961 ELP6Q0PNE2 266 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 ARMC12Q5T9G4 340 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 PAPD7Q5XG87 772 aaKnown RBP15.41■□□□□ 0.06
CCS-206ENST00000530961 ITPRIPL1Q6GPH6 555 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 ERAP2Q6P179 960 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
CCS-206ENST00000530961 TRIM69Q86WT6 500 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 NDUFAF2Q8N183 169 aa15.41■□□□□ 0.06
CCS-206ENST00000530961 ZNF567Q8N184 647 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms