RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 SCARB2Q14108 478 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SEMA3AQ14563 771 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 VEPH1Q14D04 833 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 KYNUQ16719 465 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 ZSCAN23Q3MJ62 389 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 ANXA2RQ3ZCQ2 193 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 DNAJC21Q5F1R6 531 aaKnown RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 KIAA1614Q5VZ46 1190 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 HMBOX1Q6NT76 420 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SYCE2Q6PIF2 218 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 MOB3CQ70IA8 216 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 MDGA2Q7Z553 956 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 NEK8Q86SG6 692 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 ADGRA1Q86SQ6 560 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 GPAT4Q86UL3 456 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SNX32Q86XE0 403 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 DNAAF5Q86Y56 855 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 KLBQ86Z14 1044 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SAMD14Q8IZD0 417 aaPredicted RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 ARL6IP6Q8N6S5 226 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 LINC01465Q8N7H1 131 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SYT2Q8N9I0 419 aaPredicted RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 POGLUT1Q8NBL1 392 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 ZFPM2Q8WW38 1151 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 PSPC1Q8WXF1 523 aaKnown RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 TAF4BQ92750 862 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 DPF1Q92782 380 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 CELF1Q92879 486 aaKnown RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 SLC22A18Q96BI1 424 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 ZNF653Q96CK0 615 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 C1orf74Q96LT6 269 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 GCNAQ96QF7 691 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 TM2D2Q9BX73 214 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 KLHL4Q9C0H6 718 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 ERVMER34-1Q9H9K5 563 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 GAR1Q9NY12 217 aaKnown RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 UTP6Q9NYH9 597 aaKnown RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 DLGAP2Q9P1A6 1054 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 ZNF112Q9UJU3 913 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 RABL2BQ9UNT1 228 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.43□□□□□ -1.86
CD44-229ENST00000528672 PCDHGB5Q9Y5G0 923 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 TNFRSF18Q9Y5U5 241 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SOS1Q07889 1333 aaPredicted RBP3.43□□□□□ -1.86
CD44-229ENST00000528672 SPATA31A5Q5VU36 1347 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SPATA31A6Q5VVP1 1343 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 SPATA31A7Q8IWB4 1347 aa3.43□□□□□ -1.86
CD44-229ENST00000528672 RAD54L2Q9Y4B4 1467 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 A0A1W2PQF6 199 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 A0A1W2PRG0 241 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 TCRBV7S3A2A0A539 114 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 TMEM110-MUSTN1A8MSY1 372 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 A8MZ25 164 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 KCNJ18B7U540 433 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 USP17L23D6RBM5 183 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 SCAMP1O15126 338 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 USP12O75317 370 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 TBX10O75333 385 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 BBOX1O75936 387 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 QDPRP09417 244 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 CCDC175P0C221 793 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 CCDC159P0C7I6 412 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 KRT10P13645 584 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 SELLP14151 372 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 SLC2A4P14672 509 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 GABRB1P18505 474 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 SLC15A1P46059 708 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 CAPZA2P47755 286 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 GABRB2P47870 512 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 PIP4K2AP48426 406 aaPredicted RBP3.42□□□□□ -1.86
CD44-229ENST00000528672 PPP5CP53041 499 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 MFAP4P55083 255 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 PLIN5Q00G26 463 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 ZBTB16Q05516 673 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 KCNB1Q14721 858 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 COG2Q14746 738 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 PCLAFQ15004 111 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 PPP2R5BQ15173 497 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 HIST2H2ACQ16777 129 aaPredicted RBP3.42□□□□□ -1.86
CD44-229ENST00000528672 TCP11X2Q5H9J9 407 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 AARS2Q5JTZ9 985 aaKnown RBP3.42□□□□□ -1.86
CD44-229ENST00000528672 CCDC158Q5M9N0 1113 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 C10orf76Q5T2E6 689 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 FAM171A1Q5VUB5 890 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 TMEM268Q5VZI3 342 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 TMEM65Q6PI78 240 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 CPLX2Q6PUV4 134 aaKnown RBP3.42□□□□□ -1.86
CD44-229ENST00000528672 IL27RAQ6UWB1 636 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 DHRS13Q6UX07 377 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 VSTM1Q6UX27 236 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 RANBP10Q6VN20 620 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 DCDC5Q6ZRR9 648 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 RTL10Q7L3V2 364 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 SLFN11Q7Z7L1 901 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 LINC00346Q8IVM7 164 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 EXD3Q8N9H8 876 aa3.42□□□□□ -1.86
CD44-229ENST00000528672 PNLDC1Q8NA58 520 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms