RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TP53I13Q8NBR0 393 aaPredicted RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 OR4C6Q8NH72 309 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 MDM1Q8TC05 714 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 DMXL2Q8TDJ6 3036 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 HCAR2Q8TDS4 363 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 IFT43Q96FT9 208 aa18.87■□□□□ 0.61
SPIDR-220ENST00000522900 ZNF641Q96N77 438 aaPredicted RBP18.87■□□□□ 0.61
SPIDR-220ENST00000522900 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.616e-8■■■■■ 33.5
SPIDR-220ENST00000522900 IGF2RP11717 2491 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 TRABD2BA6NFA1 517 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 NEBLO76041 1014 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 PEX11BO96011 259 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 CSF2P04141 144 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 C1SP09871 688 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 IL4RP24394 825 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 ARL4AP40617 200 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 MMRN1Q13201 1228 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 GRM3Q14832 879 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 ATP13A4Q4VNC1 1196 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 TMPRSS12Q86WS5 348 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 LZTR1Q8N653 840 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 DENND6BQ8NEG7 585 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 TUBGCP5Q96RT8 1024 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 CINPQ9BW66 212 aaPredicted RBP18.86■□□□□ 0.61
SPIDR-220ENST00000522900 PACSIN1Q9BY11 444 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 PNMA8BQ9ULN7 279 aaPredicted RBP18.86■□□□□ 0.61
SPIDR-220ENST00000522900 TRPM6Q9BX84 2022 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 PTPRBP23467 1997 aa18.86■□□□□ 0.61
SPIDR-220ENST00000522900 MYO1FO00160 1098 aa18.85■□□□□ 0.61
SPIDR-220ENST00000522900 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 CD48P09326 243 aa18.85■□□□□ 0.61
SPIDR-220ENST00000522900 SSR1P43307 286 aaKnown RBP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 SCNN1BP51168 640 aa18.85■□□□□ 0.61
SPIDR-220ENST00000522900 NSUN2Q08J23 767 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 RFTN1Q14699 578 aaPredicted RBP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 LBRQ14739 615 aaKnown RBP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 ASTE1Q2TB18 679 aaPredicted RBP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
SPIDR-220ENST00000522900 TEKT4Q8WW24 435 aa18.85■□□□□ 0.61
SPIDR-220ENST00000522900 CCDC86Q9H6F5 360 aaKnown RBP18.85■□□□□ 0.61
SPIDR-220ENST00000522900 FREM2Q5SZK8 3169 aa18.85■□□□□ 0.61
SPIDR-220ENST00000522900 K7ESM1 405 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 SCAMP1O15126 338 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 C6P13671 934 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 NME1P15531 152 aaKnown RBP18.84■□□□□ 0.61
SPIDR-220ENST00000522900 ACP1P24666 158 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 LIG3P49916 1009 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 SUOXP51687 545 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 HNRNPKP61978 463 aaKnown RBP eCLIP18.84■□□□□ 0.61
SPIDR-220ENST00000522900 ELP6Q0PNE2 266 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 IRF4Q15306 451 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 WSCD2Q2TBF2 565 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 SPECC1LQ69YQ0 1117 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 BRAT1Q6PJG6 821 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 PARGQ86W56 976 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 PROSER1Q86XN7 944 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 PGBD5Q8N414 524 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 RNF214Q8ND24 703 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 ZNF548Q8NEK5 533 aaPredicted RBP18.84■□□□□ 0.61
SPIDR-220ENST00000522900 ECHDC3Q96DC8 303 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 PSKH2Q96QS6 385 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 TCEAL2Q9H3H9 227 aaPredicted RBP18.84■□□□□ 0.61
SPIDR-220ENST00000522900 TSPY26PQ9H489 355 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 ATP13A3Q9H7F0 1226 aa18.84■□□□□ 0.61
SPIDR-220ENST00000522900 RALYQ9UKM9 306 aaKnown RBP18.84■□□□□ 0.61
SPIDR-220ENST00000522900 LY6G6EA0A0G2JKS1 128 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 TRAFD1O14545 582 aaPredicted RBP18.83■□□□□ 0.6
SPIDR-220ENST00000522900 MAFKO60675 156 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 JUPP14923 745 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 JUNDP17535 347 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 SERPINA4P29622 427 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 ARSEP51690 589 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 CDH6P55285 790 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 BCL2L1Q07817 233 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 CYP4F3Q08477 520 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 CFAP58Q5T655 872 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 HES3Q5TGS1 186 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 TMCO4Q5TGY1 634 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 NYAP1Q6ZVC0 841 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 RBFAQ8N0V3 343 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 OR8K1Q8NGG5 319 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 ZNF564Q8TBZ8 553 aaPredicted RBP18.83■□□□□ 0.6
SPIDR-220ENST00000522900 APOLD1Q96LR9 279 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 ZNF599Q96NL3 588 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 DNAJC7Q99615 494 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 NLGN3Q9NZ94 848 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 CTTNBP2NLQ9P2B4 639 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 SEPT3Q9UH03 358 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 ATP8A1Q9Y2Q0 1164 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 U3KQA8 63 aa18.83■□□□□ 0.6
SPIDR-220ENST00000522900 A8MX80 341 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 CBFA2T2O43439 604 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 TPM3P06753 285 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 CDK4P11802 303 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 GJC1P36383 396 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 MMP12P39900 470 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 RENBPP51606 427 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 THOP1P52888 689 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 TAS2R40P59535 323 aa18.82■□□□□ 0.6
SPIDR-220ENST00000522900 DAB2P98082 770 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms