RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 KPNA6O60684 536 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 ZNF623O75123 536 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 CNTN5O94779 1100 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 DPP6P42658 865 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 USP46P62068 366 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 KCNA10Q16322 511 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 C1QTNF12Q5T7M4 302 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 TRIM67Q6ZTA4 783 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 PABPC5Q96DU9 382 aaKnown RBP16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 KLHL4Q9C0H6 718 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 PRG3Q9Y2Y8 225 aaPredicted RBP16.45■□□□□ 0.22
SMG1P3-206ENST00000522841 MANSC4A6NHS7 340 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 KCNU1A8MYU2 1149 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 ATP6V1G1O75348 118 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SOAT2O75908 522 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 HAPLN1P10915 354 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 COL6A2P12110 1019 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 XRCC1P18887 633 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 PPARGP37231 505 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SLC12A2P55011 1212 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SLC10A7Q0GE19 358 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 DSC3Q14574 896 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SCML4Q8N228 414 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 LZTR1Q8N653 840 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 TTC9BQ8N6N2 239 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 JADE3Q92613 823 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 PPP2R3CQ969Q6 453 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 CNDP1Q96KN2 507 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 NPAS2Q99743 824 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SPATA16Q9BXB7 569 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 MRPL46Q9H2W6 279 aaKnown RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 DSEQ9UL01 958 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 NOD1Q9Y239 953 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 COPG1Q9Y678 874 aaKnown RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 HNRNPRO43390 633 aaKnown RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 TBX18O95935 607 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 HMBSP08397 361 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 CPB1P15086 417 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 CD86P42081 329 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 MLLT6P55198 1093 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 PTAR1Q7Z6K3 402 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 RP9Q8TA86 221 aaKnown RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SH3RF2Q8TEC5 729 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 SUSD3Q96L08 255 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 ZNF385DQ9H6B1 395 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 IGSF5Q9NSI5 407 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 ATXN10Q9UBB4 475 aa16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 FNDC1Q4ZHG4 1894 aaPredicted RBP16.44■□□□□ 0.22
SMG1P3-206ENST00000522841 GJB3O75712 270 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 MS4A2Q01362 244 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 DSC2Q02487 901 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 GSTA3Q16772 222 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 GRAMD1BQ3KR37 738 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 ALFQ53S48 1182 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 KDELC1Q6UW63 502 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 CIR1Q86X95 450 aaPredicted RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 SNX31Q8N9S9 440 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 HMCESQ96FZ2 354 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 NR1H4Q96RI1 486 aaPredicted RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 OR51F1A6NGY5 319 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 PEX11BO96011 259 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 TCN1P20061 433 aaPredicted RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 ETFBP38117 255 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 CEACAM7Q14002 265 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 MAPRE1Q15691 268 aaKnown RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 AFMIDQ63HM1 303 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 RBM12BQ8IXT5 1001 aaKnown RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 FAM156AQ8NDB6 213 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 PHF21BQ96EK2 531 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 DTNBP1Q96EV8 351 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 VTI1BQ9UEU0 232 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 STK39Q9UEW8 545 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 KCTD3Q9Y597 815 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 PATJQ8NI35 1801 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 PAMP19021 973 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 TSPAN8P19075 237 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 PRKAA2P54646 552 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 MRPS22P82650 360 aaKnown RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 EFEMP1Q12805 493 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 PSMD5Q16401 504 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 KIAA0930Q6ICG6 404 aaPredicted RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 TIGD7Q6NT04 549 aaPredicted RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 MIB1Q86YT6 1006 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 CPSF7Q8N684 471 aaKnown RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 ANKRD49Q8WVL7 239 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 TMA16Q96EY4 203 aaKnown RBP16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 TRIM62Q9BVG3 475 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 GMIPQ9P107 970 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 BLOC1S6Q9UL45 172 aa16.43■□□□□ 0.22
SMG1P3-206ENST00000522841 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
SMG1P3-206ENST00000522841 SDHDO14521 159 aa16.42■□□□□ 0.22
SMG1P3-206ENST00000522841 TXNDC9O14530 226 aa16.42■□□□□ 0.22
SMG1P3-206ENST00000522841 CCDC166P0CW27 439 aa16.42■□□□□ 0.22
SMG1P3-206ENST00000522841 OR1G1P47890 313 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms