RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RIBC2Q9H4K1 309 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 PHLPP1O60346 1717 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 TSPAN8P19075 237 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 TUFMP49411 452 aaKnown RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 PPIL2Q13356 520 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 TAF5Q15542 800 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ZNF621Q6ZSS3 439 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 SYTL1Q8IYJ3 562 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 GLIS1Q8NBF1 620 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 LENG1Q96BZ8 264 aaPredicted RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 SEMA3CQ99985 751 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 KLQ9UEF7 1012 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 KIAA1551Q9HCM1 1747 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 CLDN5O00501 218 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 TRIM24O15164 1050 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 MLYCDO95822 493 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ADRA1BP35368 520 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ASPAP45381 313 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 MAPK10P53779 464 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 KLF10Q13118 480 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 RAP1GAP2Q684P5 730 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 PPP4R4Q6NUP7 873 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 PQLC1Q8N2U9 271 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 FBXO30Q8TB52 745 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 PSMD13Q9UNM6 376 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 AP4B1Q9Y6B7 739 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 KRT87PA6NCN2 255 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 DGKAP23743 735 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 IVDP26440 423 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 SLC18A2Q05940 514 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 MAP1SQ66K74 1059 aaPredicted RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 RBM44Q6ZP01 1051 aaKnown RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 AMIGO2Q86SJ2 522 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 SPATA6LQ8N4H0 392 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ZYG11BQ9C0D3 744 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 CAB39LQ9H9S4 337 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ADPRHL2Q9NX46 363 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ARL15Q9NXU5 204 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 RCOR3Q9P2K3 495 aaPredicted RBP13.91□□□□□ -0.18
SYNPO-205ENST00000522122 ATXN10Q9UBB4 475 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 DMTF1Q9Y222 760 aa13.91□□□□□ -0.18
SYNPO-205ENST00000522122 PDZK1P1A8MUH7 402 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ABCB1P08183 1280 aaPredicted RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 GNAZP19086 355 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 AIF1P55008 147 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 NAA20P61599 178 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ACSM2AQ08AH3 577 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 FAM187BQ17R55 369 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ACSM2BQ68CK6 577 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 CLYBLQ8N0X4 340 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 OR8H2Q8N162 312 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 TPD52L3Q96J77 140 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 AHSPQ9NZD4 102 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 FAM220BPB1ANY3 271 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 GCATO75600 419 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 MED26O95402 600 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ACTR3P61158 418 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 TNK2Q07912 1038 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 PTPRNQ16849 979 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ZNF467Q7Z7K2 595 aaPredicted RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 OR52K2Q8NGK3 314 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 MED8Q96G25 268 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 WDR55Q9H6Y2 383 aaPredicted RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 RAB26Q9ULW5 256 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 TCRBV7S3A2A0A539 114 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 H3BMM5 538 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 KCNH1O95259 989 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ATP5C1P36542 298 aaKnown RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 GSSP48637 474 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 PRKG2Q13237 762 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 PDGFDQ9GZP0 370 aaPredicted RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 VWA7Q9Y334 891 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 TBKBP1A7MCY6 615 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 STK25O00506 426 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 TBX10O75333 385 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 IGSF6O95976 241 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 GRK3P35626 688 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ST13P50502 369 aaKnown RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 BNIP2Q12982 314 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 TRIP4Q15650 581 aaPredicted RBP13.9□□□□□ -0.18
SYNPO-205ENST00000522122 CRY1Q16526 586 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 DGUOKQ16854 277 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ERAP2Q6P179 960 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 FAM81AQ8TBF8 368 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 NAT14Q8WUY8 206 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 OSBPL11Q9BXB4 747 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 DGCR6LQ9BY27 220 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 PNPLA8Q9NP80 782 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ENOPH1Q9UHY7 261 aa13.9□□□□□ -0.18
SYNPO-205ENST00000522122 ZBTB14O43829 449 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms