RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SLC35A4Q96G79 324 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 PKNOX2Q96KN3 472 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 NAP1L5Q96NT1 182 aaPredicted RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 GAD1Q99259 594 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 PCYT2Q99447 389 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 LGMNQ99538 433 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 APOL6Q9BWW8 343 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 MAF1Q9H063 256 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 RWDD1Q9H446 243 aaPredicted RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 FBRSL1Q9HCM7 1045 aaKnown RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 SERTAD4Q9NUC0 356 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 EHD3Q9NZN3 535 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 FNIP2Q9P278 1114 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 PNMA2Q9UL42 364 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 ANKRD6Q9Y2G4 727 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 PTPRDP23468 1912 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 ANO9A1A5B4 782 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 H3BUI4 141 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 INO80B-WBP1J3KQ70 363 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 EGFP01133 1207 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 PDHA1P08559 390 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TSPY3P0CV98 308 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TSPY8P0CW00 308 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 RNF224P0DH78 156 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 PF4V1P10720 104 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 XRCC6P12956 609 aaKnown RBP eCLIP5.85□□□□□ -1.47
GYPB-212ENST00000511198 ZFXP17010 805 aaPredicted RBP5.85□□□□□ -1.47
GYPB-212ENST00000511198 LMO1P25800 156 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 HOXA9P31269 272 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 CCR2P41597 374 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 ZNF134P52741 427 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 UCNP55089 124 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 DMC1Q14565 340 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TBCCQ15814 346 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TBC1D25Q3MII6 688 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 CCDC157Q569K6 752 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TMEM196Q5HYL7 178 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 STOX1Q6ZVD7 989 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 LPCAT2Q7L5N7 544 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 SYT13Q7L8C5 426 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TMPRSS12Q86WS5 348 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 ARID3BQ8IVW6 561 aaPredicted RBP5.85□□□□□ -1.47
GYPB-212ENST00000511198 WDR63Q8IWG1 891 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 OLIG1Q8TAK6 271 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 CEP76Q8TAP6 659 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 DEPDC1BQ8WUY9 529 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 RLN3Q8WXF3 142 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 DPF1Q92782 380 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 SMARCD2Q92925 531 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 ZFYVE19Q96K21 471 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 LRRC3BQ96PB8 259 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 MEIS3Q99687 375 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.85□□□□□ -1.47
GYPB-212ENST00000511198 INO80BQ9C086 356 aaPredicted RBP5.85□□□□□ -1.47
GYPB-212ENST00000511198 AASDHPPTQ9NRN7 309 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 HESX1Q9UBX0 185 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 STX8Q9UNK0 236 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 WNT6Q9Y6F9 365 aa5.85□□□□□ -1.47
GYPB-212ENST00000511198 TACC2O95359 2948 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 ABCB11O95342 1321 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 PNMA6EA0A0J9YXQ4 647 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 A1L4Q6 167 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 ANKRD62A6NC57 917 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 HEPACAM2A8MVW5 462 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 K7ENP7 123 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 PPM1DO15297 605 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 CHADO15335 359 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 ADAM12O43184 909 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 BCAR3O75815 825 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 JUPP14923 745 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 KLRC1P26715 233 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 HOXD12P35452 270 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 ACTN2P35609 894 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 NOVP48745 357 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 HSD17B4P51659 736 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 SOX8P57073 446 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 BMPR2Q13873 1038 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 LYSMD4Q5XG99 296 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 INO80CQ6PI98 192 aaPredicted RBP5.84□□□□□ -1.47
GYPB-212ENST00000511198 PRSS55Q6UWB4 352 aaPredicted RBP5.84□□□□□ -1.47
GYPB-212ENST00000511198 TMEM108Q6UXF1 575 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 HSCBQ8IWL3 235 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.84□□□□□ -1.47
GYPB-212ENST00000511198 DEFB119Q8N690 84 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 BRIX1Q8TDN6 353 aaKnown RBP5.84□□□□□ -1.47
GYPB-212ENST00000511198 SNX21Q969T3 373 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 CDK5RAP3Q96JB5 506 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 SLC46A1Q96NT5 459 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 CGRRF1Q99675 332 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 CLSTN3Q9BQT9 956 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 TMEM175Q9BSA9 504 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 CPVLQ9H3G5 476 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 SMARCAD1Q9H4L7 1026 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 TRPV4Q9HBA0 871 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 IL21RQ9HBE5 538 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 BTBD3Q9Y2F9 522 aa5.84□□□□□ -1.47
GYPB-212ENST00000511198 PRG3Q9Y2Y8 225 aaPredicted RBP5.84□□□□□ -1.47
GYPB-212ENST00000511198 MYLKQ15746 1914 aa5.84□□□□□ -1.48
GYPB-212ENST00000511198 PTPRCP08575 1304 aa5.83□□□□□ -1.48
GYPB-212ENST00000511198 EVPLQ92817 2033 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms