RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 AGPAT3Q9NRZ7 376 aa9.71□□□□□ -0.86
PTPN20-221ENST00000509599 ABCC13Q9NSE7 274 aa9.71□□□□□ -0.86
PTPN20-221ENST00000509599 RCOR3Q9P2K3 495 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-221ENST00000509599 XPO7Q9UIA9 1087 aaKnown RBP9.71□□□□□ -0.86
PTPN20-221ENST00000509599 SLC25A13Q9UJS0 675 aa9.71□□□□□ -0.86
PTPN20-221ENST00000509599 TMEM184BQ9Y519 407 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-221ENST00000509599 LRRIQ3A6PVS8 624 aaPredicted RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 MSTNO14793 375 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 CLIC2O15247 247 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 AP1G1O43747 822 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 NUDT21O43809 227 aaKnown RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 PPP6R2O75170 966 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 FAM155BO75949 473 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 MT-CO1P00395 513 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 ASS1P00966 412 aaKnown RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 PRNPP04156 253 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 ITGA3P26006 1051 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 GJB2P29033 226 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 CSTF2P33240 577 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 PTGER4P35408 488 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 BLKP51451 505 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 NEK3P51956 506 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 LIMK2P53671 638 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 RNASE9P60153 205 aaKnown RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 YPEL5P62699 121 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 CLDN10P78369 228 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 SEMA5AQ13591 1074 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 TRA2AQ13595 282 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 RILPL1Q5EBL4 403 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 PAPD7Q5XG87 772 aaKnown RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 KCTD16Q68DU8 428 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 FAM129CQ86XR2 697 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 NRSN1Q8IZ57 195 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 CCAR2Q8N163 923 aaKnown RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 XXYLT1Q8NBI6 393 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 ASB12Q8WXK4 309 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 CTRCQ99895 268 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 SLAMF7Q9NQ25 335 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 MRPL40Q9NQ50 206 aaKnown RBP9.7□□□□□ -0.86
PTPN20-221ENST00000509599 LATS2Q9NRM7 1088 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 PANK4Q9NVE7 773 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 ASF1BQ9NVP2 202 aa9.7□□□□□ -0.86
PTPN20-221ENST00000509599 K7ERQ8 282 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 ZG16O60844 167 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 STK17BO94768 372 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 RASGRP1O95267 797 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 DLGAP3O95886 979 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 THRAP10827 490 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 SRCP12931 536 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 DRD2P14416 443 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 CD58P19256 250 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 MPSTP25325 297 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 CD1CP29017 333 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 ALDH4A1P30038 563 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 DPYDQ12882 1025 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 CLPPQ16740 277 aaPredicted RBP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 SMTNL2Q2TAL5 461 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 RAP1GAP2Q684P5 730 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 SLC6A19Q695T7 634 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 RD3Q7Z3Z2 195 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 ZNF438Q7Z4V0 828 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 VPS36Q86VN1 386 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 PARD3BQ8TEW8 1205 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 RNF34Q969K3 372 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 TEFMQ96QE5 360 aaKnown RBP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 RBM15Q96T37 977 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 FEM1AQ9BSK4 669 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 SLC25A23Q9BV35 468 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 TRIM8Q9BZR9 551 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 TRIT1Q9H3H1 467 aaKnown RBP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 MBNL1Q9NR56 388 aaKnown RBP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 HS3ST2Q9Y278 367 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 PCDHGA9Q9Y5G4 932 aaKnown RBP9.69□□□□□ -0.86
PTPN20-221ENST00000509599 OR51B4Q9Y5P0 310 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 RPS6KL1Q9Y6S9 549 aa9.69□□□□□ -0.86
PTPN20-221ENST00000509599 JMJD1CQ15652 2540 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 B4DGG1 531 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 SPTLC2O15270 562 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 EIF3DO15371 548 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTPN20-221ENST00000509599 SMAD6O43541 496 aaKnown RBP9.68□□□□□ -0.86
PTPN20-221ENST00000509599 LEFTY1O75610 366 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 MOCS2O96007 188 aaPredicted RBP9.68□□□□□ -0.86
PTPN20-221ENST00000509599 SNRPB2P08579 225 aaKnown RBP9.68□□□□□ -0.86
PTPN20-221ENST00000509599 TACR2P21452 398 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 CSF2RBP32927 897 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 ABL2P42684 1182 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 AP3M2P53677 418 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 HDAC4P56524 1084 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 NR1D2Q14995 579 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 ZACNQ401N2 412 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 ZNF394Q53GI3 561 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 CPZQ66K79 652 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 ZSCAN30Q86W11 494 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 ANKRD52Q8NB46 1076 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 FAM46DQ8NEK8 389 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 OR4D9Q8NGE8 314 aa9.68□□□□□ -0.86
PTPN20-221ENST00000509599 TAF4BQ92750 862 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms