RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PPP6R2O75170 966 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PTP4A3O75365 173 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 KRT38O76015 456 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CSPG5O95196 566 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 KLKB1P03952 638 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CLEC3BP05452 202 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CSF1P09603 554 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 GYS1P13807 737 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CDH2P19022 906 aaPredicted RBP2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 IL11P20809 199 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 NFKBIAP25963 317 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 ABCD3P28288 659 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 SERPINA4P29622 427 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 BSGP35613 385 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 RASSF2P50749 326 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 RBP5P82980 135 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 ROR2Q01974 943 aaKnown RBP2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 GAD2Q05329 585 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 GALNT2Q10471 571 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CSHL1Q14406 222 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 COG2Q14746 738 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 SMAD1Q15797 465 aaKnown RBP2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 ZNF569Q5MCW4 686 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 Q5PR19 223 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PLEKHS1Q5SXH7 462 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 DGAT2L7PQ6IED9 249 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 KRT80Q6KB66 452 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 LIN54Q6MZP7 749 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 HMBOX1Q6NT76 420 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CCDC144NLQ6NUI1 221 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 RINT1Q6NUQ1 792 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 INO80CQ6PI98 192 aaPredicted RBP2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PARM1Q6UWI2 310 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PET117Q6UWS5 81 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 C16orf89Q6UX73 402 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 LRIG3Q6UXM1 1119 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 BTN2A1Q7KYR7 527 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLFN11Q7Z7L1 901 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CCDC28AQ8IWP9 274 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 THNSL1Q8IYQ7 743 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 OR8H3Q8N146 312 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 C17orf53Q8N3J3 647 aaPredicted RBP2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 FSIP1Q8NA03 581 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 FAM47BQ8NA70 645 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 AVL9Q8NBF6 648 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 C7orf57Q8NEG2 295 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 SCFD2Q8WU76 684 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 KAT2AQ92830 837 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 APOPT1Q96IL0 206 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PKNOX2Q96KN3 472 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 GPR78Q96P69 363 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 SPAG5Q96R06 1193 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 GDF15Q99988 308 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 NUDT22Q9BRQ3 303 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 HGH1Q9BTY7 390 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 TEX12Q9BXU0 123 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 TRIM2Q9C040 744 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 C2orf40Q9H1Z8 148 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 MUC13Q9H3R2 512 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 EPS8L2Q9H6S3 715 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 RMI1Q9H9A7 625 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PLAC1Q9HBJ0 212 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 ATP8A2Q9NTI2 1148 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 LIN7CQ9NUP9 197 aaKnown RBP2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 TAB2Q9NYJ8 693 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 EHD2Q9NZN4 543 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 TMCC3Q9ULS5 477 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 MYO6Q9UM54 1294 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 CNPY2Q9Y2B0 182 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 DTNAQ9Y4J8 743 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 GPRASP1Q5JY77 1395 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 PNMA6EA0A0J9YXQ4 647 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 GXYLT2A0PJZ3 443 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 GAGE12JA6NER3 117 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 BECN2A8MW95 431 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 FOXO6A8MYZ6 492 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 MYO1GB0I1T2 1018 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 INAFM1C9JVW0 142 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 H0Y626 953 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 RGS14O43566 566 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 DNPH1O43598 174 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 STX6O43752 255 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 HNRNPCL1O60812 293 aaKnown RBP2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 BEST1O76090 585 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 CNTN5O94779 1100 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 DDNO94850 711 aaPredicted RBP2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 KAT7O95251 611 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 SLU7O95391 586 aaKnown RBP2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 PPP1R3DO95685 299 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 AFPP02771 609 aaKnown RBP2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 LCATP04180 440 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 TPM2P07951 284 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 UBL4AP11441 157 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 CPA1P15085 419 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 HLA-DPA1P20036 260 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 TCEA1P23193 301 aaKnown RBP2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 HOXC13P31276 330 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 AKT1P31749 480 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 KRT2P35908 639 aa2.51□□□□□ -2.01
DEPDC1B-204ENST00000509006 PPARGP37231 505 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms