RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 G3V2L1 256 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 PPEF1O14829 653 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TFECO14948 347 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 SULT1C4O75897 302 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CXCL8P10145 99 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 DBTP11182 482 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 GTF2E2P29084 291 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ECT2LQ008S8 904 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 IL5RAQ01344 420 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 NFYCQ13952 458 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 COLEC12Q5KU26 742 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 GRTP1Q5TC63 336 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 PPP4R4Q6NUP7 873 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 R3HCC1LQ7Z5L2 792 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 RALGPS2Q86X27 583 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CNTD1Q8N815 330 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 NDRG1Q92597 394 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 OMA1Q96E52 524 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 SLC10A4Q96EP9 437 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 OLFM1Q99784 485 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 C17orf80Q9BSJ5 609 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 BTRCQ9Y297 605 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 KIF13BQ9NQT8 1826 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZSCAN5BA6NJL1 495 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 PMM2O15305 246 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ITGBL1O95965 494 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 C1QAP02745 245 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 GJB1P08034 283 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 CYP4B1P13584 511 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZNF143P52747 638 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 GOLGA7BQ2TAP0 167 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ARL13BQ3SXY8 428 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZNF534Q76KX8 674 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ACOT1Q86TX2 421 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 SAMD3Q8N6K7 520 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 SH3YL1Q96HL8 342 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 LPIN3Q9BQK8 851 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 FUNDC2Q9BWH2 189 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 RIC8BQ9NVN3 520 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 MOCS1Q9NZB8 636 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 TSPAN16Q9UKR8 245 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 FNDC3AQ9Y2H6 1198 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 CAB39Q9Y376 341 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 PCDHGA8Q9Y5G5 932 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 COMMD10Q9Y6G5 202 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 H3BMM5 538 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 DLX3O60479 287 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 BCAS1O75363 584 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 GJA9P57773 515 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 MPP1Q00013 466 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 GPR162Q16538 588 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 RABL3Q5HYI8 236 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 FAM209AQ5JX71 171 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 DENND6AQ8IWF6 608 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 TERB1Q8NA31 727 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 VPS33AQ96AX1 596 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 RBBP8Q99708 897 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 COA1Q9GZY4 146 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 PRDM12Q9H4Q4 367 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 LRRC40Q9H9A6 602 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 OXSMQ9NWU1 459 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 PLIN4Q96Q06 1357 aa10.69□□□□□ -0.7
TRAPPC12-223ENST00000497597 TMEM114B3SHH9 223 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 INMTO95050 263 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 CCDC159P0C7I6 412 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 CDH1P12830 882 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 PLA2G16P53816 162 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 SELENBP1Q13228 472 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 LRP8Q14114 963 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 SMU1Q2TAY7 513 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 CCNYL2Q5T2Q4 361 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 SPATC1Q76KD6 591 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZNF354CQ86Y25 554 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 FBXO30Q8TB52 745 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 RAB2BQ8WUD1 216 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 P2RY11Q96G91 374 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 ITCHQ96J02 903 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 TMEM74Q96NL1 305 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZNF347Q96SE7 839 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 SLC25A23Q9BV35 468 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 NANOGQ9H9S0 305 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 NEK6Q9HC98 313 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 SPON1Q9HCB6 807 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 THSD7AQ9UPZ6 1657 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 A0A0A0MRY4 1105 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 XPNPEP2O43895 674 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 IFI30P13284 250 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 ITGB6P18564 788 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 PTPN7P35236 360 aa10.68□□□□□ -0.7
TRAPPC12-223ENST00000497597 SERPINB10P48595 397 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms