RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SPEM1Q8N4L4 309 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 PIP4K2CQ8TBX8 421 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 PRCCQ92733 491 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-230ENST00000491028 FICDQ9BVA6 458 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 ADGRE3Q9BY15 652 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 GDF3Q9NR23 364 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 DKK3Q9UBP4 350 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 ANAPC5Q9UJX4 755 aa18.79■□□□□ 0.6
MCF2L-230ENST00000491028 RPL26L1Q9UNX3 145 aaKnown RBP18.79■□□□□ 0.6
MCF2L-230ENST00000491028 TCRBV7S3A2A0A539 114 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 ESYT3A0FGR9 886 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 TMEM221A6NGB7 291 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 M0R296 226 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 PGLSO95336 258 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 NDST3O95803 873 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 CPP00450 1065 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 IL1BP01584 269 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 FGF1P05230 155 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 ITGB7P26010 798 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 TERF1P54274 439 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 SATB1Q01826 763 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 CST6Q15828 149 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 ANKRD22Q5VYY1 191 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 TMEM92Q6UXU6 159 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 RANBP10Q6VN20 620 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 PAF1Q8N7H5 531 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 PDCD6IPQ8WUM4 868 aaKnown RBP18.78■□□□□ 0.6
MCF2L-230ENST00000491028 ART4Q93070 314 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 KLHL32Q96NJ5 620 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 ANKZF1Q9H8Y5 726 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 ARNT2Q9HBZ2 717 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 SCML1Q9UN30 329 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 CHKBQ9Y259 395 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 PCDHB9Q9Y5E1 797 aa18.78■□□□□ 0.6
MCF2L-230ENST00000491028 KPNA3O00505 521 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-230ENST00000491028 PRLP01236 227 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 MLNP12872 115 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 AOC1P19801 751 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 GRIA4P48058 902 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 PSMD8P48556 350 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 POLR2LP62875 67 aaKnown RBP18.77■□□□□ 0.6
MCF2L-230ENST00000491028 ZBTB16Q05516 673 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 CDH17Q12864 832 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 SPARCL1Q14515 664 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 SLC1A5Q15758 541 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 ERCC6LQ2NKX8 1250 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 SYCP2LQ5T4T6 812 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 MMAAQ8IVH4 418 aaKnown RBP18.77■□□□□ 0.6
MCF2L-230ENST00000491028 NDUFAF2Q8N183 169 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 EIF1ADQ8N9N8 165 aaKnown RBP18.77■□□□□ 0.6
MCF2L-230ENST00000491028 XAB2Q9HCS7 855 aaKnown RBP18.77■□□□□ 0.6
MCF2L-230ENST00000491028 DYRK4Q9NR20 520 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 SARDHQ9UL12 918 aa18.77■□□□□ 0.6
MCF2L-230ENST00000491028 TCRBV21S2A2A0A5A6 115 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 TP73O15350 636 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 AGTP01019 485 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 PDGFBP01127 241 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 PDHA1P08559 390 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 ATXN1LP0C7T5 689 aaKnown RBP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 C5AR1P21730 350 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 NFKBIAP25963 317 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 TNFRSF8P28908 595 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 SUOXP51687 545 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 CLCN5P51795 746 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 EPHB1P54762 984 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 RPS14P62263 151 aaKnown RBP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 LRRC8BQ6P9F7 803 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 ZNF534Q76KX8 674 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 GPR161Q8N6U8 529 aaKnown RBP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 LPCAT1Q8NF37 534 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 HINFPQ9BQA5 517 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 FOXP3Q9BZS1 431 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 MKRN2Q9H000 416 aaKnown RBP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 CASS4Q9NQ75 786 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 DLGAP2Q9P1A6 1054 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 PHTF1Q9UMS5 762 aa18.76■□□□□ 0.59
MCF2L-230ENST00000491028 V9GYY5 206 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-230ENST00000491028 TECTAO75443 2155 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 USP12O75317 370 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 PPFIA2O75334 1257 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 ALDH1A2O94788 518 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 DNTTP04053 509 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 TUBBP07437 444 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 DCNP07585 359 aaKnown RBP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 MCM3P25205 808 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 SLC8A1P32418 973 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 PLTPP55058 493 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 SFSWAPQ12872 951 aaKnown RBP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 GALNT3Q14435 633 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 HLTFQ14527 1009 aaKnown RBP eCLIP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 TRADDQ15628 312 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 TTC31Q49AM3 519 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 SIRPB2Q5JXA9 342 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 DENND5AQ6IQ26 1287 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 ZDHHC24Q6UX98 284 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 MAMSTRQ6ZN01 415 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 PARS2Q7L3T8 475 aaKnown RBP18.75■□□□□ 0.59
MCF2L-230ENST00000491028 KDELC2Q7Z4H8 507 aa18.75■□□□□ 0.59
MCF2L-230ENST00000491028 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms