RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TPRG1LQ5T0D9 272 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 KIAA1161Q6NSJ0 714 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 DNAJC24Q6P3W2 148 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 TTC7BQ86TV6 843 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 DNAAF5Q86Y56 855 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-215ENST00000485550 C3orf20Q8ND61 904 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 ISG20Q96AZ6 181 aaKnown RBP10.72□□□□□ -0.69
HMGN1-215ENST00000485550 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 SLC46A1Q96NT5 459 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 MCEEQ96PE7 176 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
HMGN1-215ENST00000485550 GPATCH2LQ9NWQ4 482 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 U3KQA8 63 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 CACNA1DQ01668 2161 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 LRRK2Q5S007 2527 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 BSNQ9UPA5 3926 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 TMCO5BA8MYB1 307 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 INSIG1O15503 277 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 SPINT1O43278 529 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 TSPAN6O43657 245 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 AP1G1O43747 822 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 MMP20O60882 483 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 TMCC1O94876 653 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 POP4O95707 220 aaKnown RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 GSRP00390 522 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 ATP1A3P13637 1013 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 GEMIN4P57678 1058 aaKnown RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 RHOAP61586 193 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 CLN3Q13286 438 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 PDE1CQ14123 709 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 NCAPHQ15003 741 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 STX1AQ16623 288 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 EFHC2Q5JST6 749 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 CRTC1Q6UUV9 634 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 GDPD4Q6W3E5 623 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 KYAT3Q6YP21 454 aaKnown RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 THSD4Q6ZMP0 1018 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 ATG14Q6ZNE5 492 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 MON1BQ7L1V2 547 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 APTXQ7Z2E3 356 aaKnown RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 VPS36Q86VN1 386 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 IFI44Q8TCB0 444 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 MAPK15Q8TD08 544 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 NTAN1Q96AB6 310 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 CCDC97Q96F63 343 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 HMCESQ96FZ2 354 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 PRR11Q96HE9 360 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 GBP4Q96PP9 640 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 KLF6Q99612 283 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-215ENST00000485550 C1QTNF2Q9BXJ5 285 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 TAS2R14Q9NYV8 317 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 ANKMY1Q9P2S6 941 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 KLF15Q9UIH9 416 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 ICE1Q9Y2F5 2266 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 DAAM1Q9Y4D1 1078 aa10.71□□□□□ -0.69
HMGN1-215ENST00000485550 SPTBN1Q01082 2364 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 UNC79Q9P2D8 2635 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 SPTY2D1-AS1A0A0U1RR47 76 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 TCRBV5S1A1TA0A578 114 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ANKRD62A6NC57 917 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 NEMP2A6NFY4 417 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 LRRC10BA6NIK2 292 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 CDRT15L2A8MXV6 281 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 RASA4BC9J798 803 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 K7ESM1 405 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 SCAMP1O15126 338 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 TEX33O43247 280 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 RASA4O43374 803 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 GP1BAP07359 652 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ALPPL2P10696 532 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 JUNDP17535 347 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 TNFAIP3P21580 790 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 RABIFP47224 123 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ZNF143P52747 638 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 GSCP56915 257 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 HNRNPKP61978 463 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 OGDHQ02218 1023 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 SRSF6Q13247 344 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 C1orf61Q13536 156 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 CYTH1Q15438 398 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 DCUN1D2Q6PH85 259 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 IGF2-ASQ6U949 168 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 DCP2Q8IU60 420 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 MCOLN2Q8IZK6 566 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 RTL3Q8N8U3 475 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ZNF548Q8NEK5 533 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 LMX1AQ8TE12 382 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 EXTL1Q92935 676 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 RAB7BQ96AH8 199 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 CELF6Q96J87 481 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 EXOC2Q96KP1 924 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 GDAP1L1Q96MZ0 367 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ERGIC2Q96RQ1 377 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 CCNL2Q96S94 520 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ARHGAP9Q9BRR9 750 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 WRAP53Q9BUR4 548 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 TTYH3Q9C0H2 523 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms