RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 A0A1W2PQ72 361 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 TMCC2O75069 709 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SEMA3DO95025 777 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 VAPBO95292 243 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PSEN2P49810 448 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FKBP1CQ5VVH2 108 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SLC5A5Q92911 643 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 NR2F1P10589 423 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 AMD1P17707 334 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 MIPP30301 263 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 IGFALSP35858 605 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 DPYSL3Q14195 570 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TMPRSS11AQ6ZMR5 421 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PIK3C3Q8NEB9 887 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 C18orf25Q96B23 403 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SENP6Q9GZR1 1112 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■■■□ 23.3
VEGFA-212ENST00000480614 TMEM39AQ9NV64 488 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SOHLH2Q9NX45 425 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ZDBF2Q9HCK1 2354 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 MDM4O15151 490 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 RPL22P35268 128 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PPM1AP35813 382 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ASMTP46597 345 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 DGCR14Q96DF8 476 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 CDRT15Q96T59 188 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TMEM134Q9H6X4 195 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 CHST10O43529 356 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GATBO75879 557 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TMEM119Q4V9L6 283 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 NOL9Q5SY16 702 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 BTN2A1Q7KYR7 527 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PIWIL2Q8TC59 973 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 C3orf14Q9HBI5 128 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GPN1Q9HCN4 374 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TNFRSF21O75509 655 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 CCNYL3P0C7X3 344 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 FDPSP14324 419 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 DPEP1P16444 411 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 NOS2P35228 1153 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 AP3S2P59780 193 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SLC39A12Q504Y0 691 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 RMI1Q9H9A7 625 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 OSGEPQ9NPF4 335 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 EXD2Q9NVH0 621 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SPTBN2O15020 2390 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 MAP3K6O95382 1288 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PSMG1O95456 288 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GLI1P08151 1106 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ARP10275 920 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PECAM1P16284 738 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ERCC2P18074 760 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 CDH4P55283 916 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TUBA4AP68366 448 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GALNT3Q14435 633 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 IQSEC1Q6DN90 963 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TAF8Q7Z7C8 310 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SEMA3GQ9NS98 782 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GAKO14976 1311 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 RPL21P46778 160 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 LIPMQ5VYY2 423 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ZC3H7AQ8IWR0 971 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PRCCQ92733 491 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 RNPEPL1Q9HAU8 725 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 WBP11Q9Y2W2 641 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SPATA31A5Q5VU36 1347 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SPATA31A7Q8IWB4 1347 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ZNF143P52747 638 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 IKBKEQ14164 716 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 RAET1GQ6H3X3 334 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 HSFY1Q96LI6 401 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 HPSEQ9Y251 543 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TBC1D3BA6NDS4 549 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 H3BNX3 289 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PROCP04070 461 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ATP4AP20648 1035 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 OLFML2AQ68BL7 652 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TRPV1Q8NER1 839 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 SEMA4AQ9H3S1 761 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.6□□□□□ -0.871e-9■□□□□ 10.2
VEGFA-212ENST00000480614 SQORQ9Y6N5 450 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 CACNB4O00305 520 aaPredicted RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 PIGNO95427 931 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 TGFB2P61812 414 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 MBTD1Q05BQ5 628 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 AP5B1Q2VPB7 878 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 GPAT3Q53EU6 434 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 INTS1Q8N201 2190 aaKnown RBP9.6□□□□□ -0.87
VEGFA-212ENST00000480614 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ZDHHC6Q9H6R6 413 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 ARHGAP23Q9P227 1491 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 NCANO14594 1321 aa9.6□□□□□ -0.87
VEGFA-212ENST00000480614 CD86P42081 329 aa9.59□□□□□ -0.87
VEGFA-212ENST00000480614 FCHO2Q0JRZ9 810 aa9.59□□□□□ -0.87
VEGFA-212ENST00000480614 SLC15A2Q16348 729 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms