RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ETNK2Q9NVF9 386 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 NLGN3Q9NZ94 848 aa17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 APOBEC3BQ9UH17 382 aaKnown RBP17.56■□□□□ 0.4
ECHDC1-216ENST00000479525 AQP9O43315 295 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 BRINP1O60477 761 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 LRCH4O75427 683 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 PCCBP05166 539 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 ALPPL2P10696 532 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 CKMT1AP12532 417 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 EIF2S3P41091 472 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 THOP1P52888 689 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 INO80DQ53TQ3 878 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 PRRT3Q5FWE3 981 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 CPNE8Q86YQ8 564 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 PHACTR4Q8IZ21 702 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 HSPH1Q92598 858 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 TSACCQ96A04 125 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 NAF1Q96HR8 494 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 SUV39H2Q9H5I1 410 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 RETREG1Q9H6L5 497 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 SP110Q9HB58 689 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 AIPL1Q9NZN9 384 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 CWC15Q9P013 229 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 OR1A2Q9Y585 309 aa17.55■□□□□ 0.4
ECHDC1-216ENST00000479525 ARHGAP42A6NI28 874 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 H3BM21 787 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 OPA1O60313 960 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 PALMO75781 387 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 C6P13671 934 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 DESP17661 470 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 TGM2P21980 687 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 AMPD1P23109 780 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 EIF4A3P38919 411 aaKnown RBP17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 ADKP55263 362 aaKnown RBP17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 NR1I3Q14994 352 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 PERM1Q5SV97 790 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 FAXCQ5TGI0 409 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 EFL1Q7Z2Z2 1120 aaKnown RBP17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 RD3Q7Z3Z2 195 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 SRLQ86TD4 932 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 PAF1Q8N7H5 531 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 PLA2G15Q8NCC3 412 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 VCPIP1Q96JH7 1222 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 LRRC61Q9BV99 259 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 CLPBQ9H078 707 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 SYNDIG1Q9H7V2 258 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 DKK4Q9UBT3 224 aa17.54■□□□□ 0.4
ECHDC1-216ENST00000479525 PMS2P1A4D2B8 440 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 RNF8O76064 485 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 MPOP05164 745 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 PRKCIP41743 596 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 NDST2P52849 883 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 AIF1P55008 147 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 FANCCQ00597 558 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 ILKQ13418 452 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 COL9A2Q14055 689 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 PTPRRQ15256 657 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 UGP2Q16851 508 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 WSCD2Q2TBF2 565 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CFAP58Q5T655 872 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 DCP2Q8IU60 420 aaKnown RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 HID1Q8IV36 788 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 DENND6BQ8NEG7 585 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 MAPK15Q8TD08 544 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 FUBP1Q96AE4 644 aaKnown RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 ARHGEF26Q96DR7 871 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 BBC3Q96PG8 261 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CINPQ9BW66 212 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 SIRPGQ9P1W8 387 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 DKK3Q9UBP4 350 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CXorf51AA0A1B0GTR3 108 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 A0A1W2PQC6 194 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 NEMP2A6NFY4 417 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 AGRPO00253 132 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CSO75390 466 aaKnown RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 TSHRP16473 764 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 GJC1P36383 396 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 LIG3P49916 1009 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 INPP5AQ14642 412 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 TMEM52BQ4KMG9 183 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 FAM182AQ5T1J6 154 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 HGSNATQ68CP4 663 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 ENPP7Q6UWV6 458 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 PELI3Q8N2H9 469 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 DCBLD1Q8N8Z6 715 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 RFFLQ8WZ73 363 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 IFT43Q96FT9 208 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 IL12RB2Q99665 862 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 CPEB1Q9BZB8 566 aaKnown RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 THAP2Q9H0W7 228 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 SUDS3Q9H7L9 328 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 RAI2Q9Y5P3 530 aa17.53■□□□□ 0.4
ECHDC1-216ENST00000479525 A0A0U1RQS6 177 aa17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 RIOK3O14730 519 aaKnown RBP17.52■□□□□ 0.39
ECHDC1-216ENST00000479525 LZTS3O60299 673 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms