RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	OSER1	Q9NX31	292 aa		27.77	■■■□□ 2.04
CHKB-208	ENST00000479003	LOC100653049	A0A140TA62	436 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003		A0A1W2PQH9	124 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	TARM1	B6A8C7	271 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	KRT34	O76011	436 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	HAPLN1	P10915	354 aa	Predicted RBP	27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	RPL14	P50914	215 aa	Known RBP	27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	DSG1	Q02413	1049 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	CUL3	Q13618	768 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	STON2	Q8WXE9	905 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	CASP10	Q92851	521 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	FCRL2	Q96LA5	508 aa	Predicted RBP	27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	RTKN	Q9BST9	563 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	SFMBT1	Q9UHJ3	866 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	ARHGAP26	Q9UNA1	814 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	PLXNA3	P51805	1871 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	HDAC3	O15379	428 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	VAPB	O95292	243 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	LINC00271	P0C7V0	271 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	ARNT	P27540	789 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	EPHB1	P54762	984 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	HTRA4	P83105	476 aa	Predicted RBP	27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	AFMID	Q63HM1	303 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	TIGD7	Q6NT04	549 aa	Predicted RBP	27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	ESRP1	Q6NXG1	681 aa	Known RBP	27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	DENND6A	Q8IWF6	608 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	DEFB107A	Q8IZN7	70 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	UCMA	Q8WVF2	138 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	AUTS2	Q8WXX7	1259 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	SCYL1	Q96KG9	808 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	SCML2	Q9UQR0	700 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	ACOT9	Q9Y305	439 aa		27.76	■■■□□ 2.03
CHKB-208	ENST00000479003	DPPA5	A6NC42	116 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	HLA-DQB2	P05538	268 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	AVPR1A	P37288	418 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	MPP1	Q00013	466 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	LRRC8E	Q6NSJ5	796 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	FSTL5	Q8N475	847 aa	Predicted RBP	27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	AGR3	Q8TD06	166 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	C2orf15	Q8WU43	125 aa	Known RBP	27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	JADE3	Q92613	823 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	HERC2P3	Q9BVR0	1158 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	CYP4F11	Q9HBI6	524 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	NDFIP2	Q9NV92	336 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	NUDT5	Q9UKK9	219 aa		27.75	■■■□□ 2.03
CHKB-208	ENST00000479003	MSI1	O43347	362 aa	Known RBP	27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	SKAP2	O75563	359 aa	Predicted RBP	27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	BAG2	O95816	211 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	LINGO3	P0C6S8	592 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	ATF6	P18850	670 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	PGGT1B	P53609	377 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	RAB10	P61026	200 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	PRKAA1	Q13131	559 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	CCNI	Q14094	377 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	DDX53	Q86TM3	631 aa	Known RBP	27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	CNDP1	Q96KN2	507 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	FBXO44	Q9H4M3	255 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	IL37	Q9NZH6	218 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	FAM95C	A0A1B0GW59	222 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	PIGN	O95427	931 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	CRABP2	P29373	138 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	GLRB	P48167	497 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	CTBP1	Q13363	440 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	ARL13A	Q5H913	290 aa	Predicted RBP	27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	SEL1L3	Q68CR1	1132 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	TMEM154	Q6P9G4	183 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	MFSD6L	Q8IWD5	586 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	MOCOS	Q96EN8	888 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	UBE2O	Q9C0C9	1292 aa	Known RBP	27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	TREX1	Q9NSU2	369 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	RBM22	Q9NW64	420 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	GMIP	Q9P107	970 aa		27.74	■■■□□ 2.03
CHKB-208	ENST00000479003	GREB1	Q4ZG55	1949 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	PDE5A	O76074	875 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	NRG1	Q02297	640 aa	Predicted RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	PEX6	Q13608	980 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	TMC7	Q7Z402	723 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	APLF	Q8IW19	511 aa	Predicted RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	FBXW8	Q8N3Y1	598 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	GPR78	Q96P69	363 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	ZBED2	Q9BTP6	218 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	SSX2IP	Q9Y2D8	614 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	GRID2	O43424	1007 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	BUD23	O43709	281 aa	Known RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	ZMPSTE24	O75844	475 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	TUB	P50607	506 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	NAGLU	P54802	743 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	TBL3	Q12788	808 aa	Known RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	PSRC1	Q6PGN9	363 aa	Predicted RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	RANBP10	Q6VN20	620 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	LRRC49	Q8IUZ0	686 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	CEP97	Q8IW35	865 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	RTL3	Q8N8U3	475 aa	Known RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	C2CD4A	Q8NCU7	369 aa	Predicted RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	GIPC2	Q8TF65	315 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	SPATA17	Q96L03	361 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	MRGPRX2	Q96LB1	330 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	LENG8	Q96PV6	779 aa	Predicted RBP	27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	VTI1B	Q9UEU0	232 aa		27.73	■■■□□ 2.03
CHKB-208	ENST00000479003	POMP	Q9Y244	141 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms