RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 FAM221BA6H8Z2 402 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 SRRM3A6NNA2 597 aaPredicted RBP19.24■□□□□ 0.67
EPHB4-205ENST00000478459 TAF4O00268 1085 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 ADKP55263 362 aaKnown RBP19.24■□□□□ 0.67
EPHB4-205ENST00000478459 CDH6P55285 790 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 MAXP61244 160 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 DAB2P98082 770 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 SLC25A11Q02978 314 aaKnown RBP19.24■□□□□ 0.67
EPHB4-205ENST00000478459 IL10RBQ08334 325 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 C1orf61Q13536 156 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 IRF4Q15306 451 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 DPYSL2Q16555 572 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 FAM182AQ5T1J6 154 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 TMCO3Q6UWJ1 677 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 PDCD6IPQ8WUM4 868 aaKnown RBP19.24■□□□□ 0.67
EPHB4-205ENST00000478459 CPEB1Q9BZB8 566 aaKnown RBP19.24■□□□□ 0.67
EPHB4-205ENST00000478459 DONSONQ9NYP3 566 aa19.24■□□□□ 0.67
EPHB4-205ENST00000478459 PNMA8BQ9ULN7 279 aaPredicted RBP19.24■□□□□ 0.67
EPHB4-205ENST00000478459 TRABD2BA6NFA1 517 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 EIF3CLB5ME19 914 aaKnown RBP19.23■□□□□ 0.67
EPHB4-205ENST00000478459 MYO1FO00160 1098 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 TPM3P06753 285 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 C6P13671 934 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 RABIFP47224 123 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 LIG3P49916 1009 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 THOP1P52888 689 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 TAS2R40P59535 323 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 LBRQ14739 615 aaKnown RBP19.23■□□□□ 0.67
EPHB4-205ENST00000478459 PTPRRQ15256 657 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 UGP2Q16851 508 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 BOLA3Q53S33 107 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 PSTKQ8IV42 348 aaKnown RBP19.23■□□□□ 0.67
EPHB4-205ENST00000478459 LMX1AQ8TE12 382 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 CENPTQ96BT3 561 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 EIF3CQ99613 913 aaKnown RBP19.23■□□□□ 0.67
EPHB4-205ENST00000478459 CHP1Q99653 195 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 DEF6Q9H4E7 631 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 SPTLC3Q9NUV7 552 aa19.23■□□□□ 0.67
EPHB4-205ENST00000478459 ZFHX4Q86UP3 3567 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 SPTY2D1-AS1A0A0U1RR47 76 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 CBFA2T2O43439 604 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 LZTS3O60299 673 aaPredicted RBP19.22■□□□□ 0.67
EPHB4-205ENST00000478459 PCCBP05166 539 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 GIMD1P0DJR0 217 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 JUPP14923 745 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 JUNDP17535 347 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 CKMT2P17540 419 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 SERPINA4P29622 427 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 HCAR3P49019 387 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 BCL2L1Q07817 233 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 EIF2B5Q13144 721 aaKnown RBP19.22■□□□□ 0.67
EPHB4-205ENST00000478459 ZNF235Q14590 738 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 DEFB133Q30KQ1 61 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 PROX2Q3B8N5 592 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 ZFYVE27Q5T4F4 411 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 HES3Q5TGS1 186 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 SPECC1LQ69YQ0 1117 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 PGBD5Q8N414 524 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 TP53I13Q8NBR0 393 aaPredicted RBP19.22■□□□□ 0.67
EPHB4-205ENST00000478459 ZNF548Q8NEK5 533 aaPredicted RBP19.22■□□□□ 0.67
EPHB4-205ENST00000478459 TSC1Q92574 1164 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 LENG8Q96PV6 779 aaPredicted RBP19.22■□□□□ 0.67
EPHB4-205ENST00000478459 CCDC86Q9H6F5 360 aaKnown RBP19.22■□□□□ 0.67
EPHB4-205ENST00000478459 ATP13A3Q9H7F0 1226 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 DKK3Q9UBP4 350 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 PCDHGC4Q9Y5F7 938 aa19.22■□□□□ 0.67
EPHB4-205ENST00000478459 CHD6Q8TD26 2715 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 RIOK3O14730 519 aaKnown RBP19.21■□□□□ 0.67
EPHB4-205ENST00000478459 PFN3P60673 137 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 CYP4F3Q08477 520 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 ACAP1Q15027 740 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 SMAD1Q15797 465 aaKnown RBP19.21■□□□□ 0.67
EPHB4-205ENST00000478459 TMEM52BQ4KMG9 183 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 HS1BP3Q53T59 392 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 DENND2CQ68D51 928 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 ERAP2Q6P179 960 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 RD3Q7Z3Z2 195 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 PARGQ86W56 976 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 GALNT15Q8N3T1 639 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 ATPAF2Q8N5M1 289 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 NIPA2Q8N8Q9 360 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 OR4C6Q8NH72 309 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 SEPT3Q9UH03 358 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 NENFQ9UMX5 172 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 OR1A2Q9Y585 309 aa19.21■□□□□ 0.67
EPHB4-205ENST00000478459 ANKRD11Q6UB99 2663 aaPredicted RBP19.2■□□□□ 0.66
EPHB4-205ENST00000478459 A0A0U1RQS6 177 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 TMEM8BA6NDV4 472 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 MFSD11O43934 449 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 AKR1B10O60218 316 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 CSF2P04141 144 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 CELA2BP08218 269 aaPredicted RBP19.2■□□□□ 0.66
EPHB4-205ENST00000478459 IL4RP24394 825 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 HNRNPKP61978 463 aaKnown RBP eCLIP19.2■□□□□ 0.66
EPHB4-205ENST00000478459 ELP6Q0PNE2 266 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 TARDBPQ13148 414 aaKnown RBP eCLIP19.2■□□□□ 0.66
EPHB4-205ENST00000478459 ZNF211Q13398 564 aaPredicted RBP19.2■□□□□ 0.66
EPHB4-205ENST00000478459 MESDQ14696 234 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 LRRC14Q15048 493 aa19.2■□□□□ 0.66
EPHB4-205ENST00000478459 WSCD2Q2TBF2 565 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms