RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 SHOX2O60902 331 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 WDHD1O75717 1129 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 NDUFB8O95169 186 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 IPO7O95373 1038 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MMP1P03956 469 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 T-ENOLP0DO92 83 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 EPB41P11171 864 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MYL4P12829 197 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 ATP1A3P13637 1013 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 TSHRP16473 764 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 TFEBP19484 476 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MATN1P21941 496 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 TBXAS1P24557 533 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 KLRK1P26718 216 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 NDUFS1P28331 727 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 CASP5P51878 434 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 IRX3P78415 501 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 PPFIA1Q13136 1202 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 DRP2Q13474 957 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 GAB1Q13480 694 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 BFSP2Q13515 415 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 CASP8Q14790 479 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 TMEM196Q5HYL7 178 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 ALS2CLQ60I27 953 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 TTLL5Q6EMB2 1281 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 KIAA0408Q6ZU52 694 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 CCDC28AQ8IWP9 274 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 UEVLDQ8IX04 471 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 PDILTQ8N807 584 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 RNF152Q8N8N0 203 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 EIF1ADQ8N9N8 165 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 AFAP1L1Q8TED9 768 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 RBM17Q96I25 401 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 TCEANC2Q96MN5 208 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 SENP7Q9BQF6 1050 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 ANKZF1Q9H8Y5 726 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MAGEF1Q9HAY2 307 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MOV10Q9HCE1 1003 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MSRB1Q9NZV6 116 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 ADD3Q9UEY8 706 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 LIMA1Q9UHB6 759 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 RSPH14Q9UHP6 348 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 AGO2Q9UKV8 859 aaKnown RBP4.85□□□□□ -1.63
LMBR1-216ENST00000477983 MYO6Q9UM54 1294 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 JRKLQ9Y4A0 524 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 AKAP11Q9UKA4 1901 aa4.85□□□□□ -1.63
LMBR1-216ENST00000477983 A0A1B0GUL6 1792 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 A0A0G2JK05 382 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 ERICH2A1L162 156 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 TMCO5BA8MYB1 307 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 EIF3CLB5ME19 914 aaKnown RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 EBAG9O00559 213 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 SH2B2O14492 632 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 PRPF4O43172 522 aaKnown RBP eCLIP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 GPAA1O43292 621 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 ATG13O75143 517 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 MMP10P09238 476 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CALM1P0DP23 149 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CALM2P0DP24 149 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CALM3P0DP25 149 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 MMP8P22894 467 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 EEF1GP26641 437 aaKnown RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 TNFRSF8P28908 595 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CYLC1P35663 651 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 SOX2P48431 317 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 ZNF84P51523 738 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 GTF2A1P52655 376 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 PGGT1BP53609 377 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 HAND2P61296 217 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 PNOCQ13519 176 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 HLTFQ14527 1009 aaKnown RBP eCLIP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 ARL6IP4Q66PJ3 421 aaKnown RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 TLDC1Q6P9B6 456 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 MMS22LQ6ZRQ5 1243 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 BEND5Q7L4P6 421 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 ARMC9Q7Z3E5 817 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 RFX6Q8HWS3 928 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CCDC50Q8IVM0 306 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CCDC33Q8N5R6 958 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 OR8K1Q8NGG5 319 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 OVCA2Q8WZ82 227 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 P3H4Q92791 437 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 GJA10Q969M2 543 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 DHX58Q96C10 678 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 FAM84BQ96KN1 310 aaPredicted RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 EIF3CQ99613 913 aaKnown RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 ZPBPQ9BS86 351 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CRACR2AQ9BSW2 395 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 PAGR1Q9BTK6 254 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 NACAP1Q9BZK3 213 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 CUEDC2Q9H467 287 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 PDE11AQ9HCR9 933 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 RBM28Q9NW13 759 aaKnown RBP4.84□□□□□ -1.63
LMBR1-216ENST00000477983 VPS18Q9P253 973 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 RWDD2AQ9UIY3 292 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 MAN1B1Q9UKM7 699 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 COG5Q9UP83 839 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 SAR1BQ9Y6B6 198 aa4.84□□□□□ -1.63
LMBR1-216ENST00000477983 MYO5AQ9Y4I1 1855 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms