RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 FBXL20Q96IG2 436 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 HAUS8Q9BT25 410 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 EIF2AQ9BY44 585 aaKnown RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 KLHL25Q9H0H3 589 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 DHX35Q9H5Z1 703 aaKnown RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 PRMT7Q9NVM4 692 aaPredicted RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 DUS2Q9NX74 493 aaKnown RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 KLQ9UEF7 1012 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 NEU3Q9UQ49 428 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 SNX9Q9Y5X1 595 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 HTTP42858 3142 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 SAC3D1A6NKF1 404 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 SOBPA7XYQ1 873 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 PSMD11O00231 422 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 TOR1BO14657 336 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 PGAM1P18669 254 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 SDC4P31431 198 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 NR4A2P43354 598 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 NR2C2P49116 596 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 RABGGTBP53611 331 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 RPL26P61254 145 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 MRPL28Q13084 256 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 RAB39AQ14964 217 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 TIGD2Q4W5G0 525 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 FSTL4Q6MZW2 842 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 HMBOX1Q6NT76 420 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 ALDH16A1Q8IZ83 802 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 TNIP2Q8NFZ5 429 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 PDCD6IPQ8WUM4 868 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 CEP295NLQ96MC4 621 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 GGA3Q9NZ52 723 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 NLRC5Q86WI3 1866 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 RNF103O00237 685 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 TPST1O60507 370 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 GLRA3O75311 464 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 TIPRLO75663 272 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 YBX3P16989 372 aaKnown RBP eCLIP8.46□□□□□ -1.061e-7■□□□□ 9.9
VAPB-205ENST00000476395 CNTFP26441 200 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 PIK3R1P27986 724 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 SOX11P35716 441 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 POLR2IP36954 125 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 RPS3AP61247 264 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 IFITM3Q01628 133 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 COX10Q12887 443 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 ANO4Q32M45 955 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 NIPAL1Q6NVV3 410 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 HFE2Q6ZVN8 426 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 BHLHA9Q7RTU4 235 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 RBBP8Q99708 897 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 TNFRSF12AQ9NP84 129 aa8.46□□□□□ -1.06
VAPB-205ENST00000476395 C20orf96Q9NUD7 363 aaPredicted RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 TUBA8Q9NY65 449 aaPredicted RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 DNMT3BQ9UBC3 853 aaKnown RBP8.46□□□□□ -1.06
VAPB-205ENST00000476395 A0A0G2JLL6 359 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 MATN1P21941 496 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 SESN2P58004 480 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 INSCQ1MX18 579 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 RGS21Q2M5E4 152 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 SYPL2Q5VXT5 272 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 BNC2Q6ZN30 1099 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 PRRT2Q7Z6L0 340 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 SIX5Q8N196 739 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 ANKRD49Q8WVL7 239 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ACDQ96AP0 544 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 SLCO4A1Q96BD0 722 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 GPR78Q96P69 363 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 NPLQ9BXD5 320 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 HIPK3Q9H422 1215 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 POLR1BQ9H9Y6 1135 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 EVLQ9UI08 416 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 DAPK2Q9UIK4 370 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 KIAA1257Q9ULG3 409 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 CARD8Q9Y2G2 431 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 PTPRDP23468 1912 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 HTRA2O43464 458 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 USP12O75317 370 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 LGALS2P05162 132 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 GSSP48637 474 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 NDUFV1P49821 464 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 TXNL4AP83876 142 aaKnown RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 KCNC4Q03721 635 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 SOX4Q06945 474 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 CLPPQ16740 277 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 TRIM16LQ309B1 348 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 FAM131BQ86XD5 332 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 KLHDC8BQ8IXV7 354 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 GPC2Q8N158 579 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 PSD4Q8NDX1 1056 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 OR52K1Q8NGK4 314 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 CERS2Q96G23 380 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 CNDP1Q96KN2 507 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ADAMTS10Q9H324 1103 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 FAM124BQ9H5Z6 455 aaPredicted RBP8.45□□□□□ -1.06
VAPB-205ENST00000476395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.45□□□□□ -1.06
VAPB-205ENST00000476395 GPSM3Q9Y4H4 160 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 ACOT8O14734 319 aa8.45□□□□□ -1.06
VAPB-205ENST00000476395 DYNC1LI2O43237 492 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms