RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 TWNKQ96RR1 684 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 HAPLN3Q96S86 360 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 DDA1Q9BW61 102 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 KRTAP3-3Q9BYR6 98 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 SLC13A1Q9BZW2 595 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 MRPL44Q9H9J2 332 aaKnown RBP4.33□□□□□ -1.72
CPS1-205ENST00000467353 PNPLA8Q9NP80 782 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.33□□□□□ -1.72
CPS1-205ENST00000467353 SLC39A1Q9NY26 324 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 APOBEC3BQ9UH17 382 aaKnown RBP4.33□□□□□ -1.72
CPS1-205ENST00000467353 PHTF1Q9UMS5 762 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 ATP8A1Q9Y2Q0 1164 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 HBS1LQ9Y450 684 aaKnown RBP4.33□□□□□ -1.72
CPS1-205ENST00000467353 CEP83Q9Y592 693 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 PCDHB14Q9Y5E9 798 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 PCDHGC4Q9Y5F7 938 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 MRPS18BQ9Y676 258 aaKnown RBP4.33□□□□□ -1.72
CPS1-205ENST00000467353 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
CPS1-205ENST00000467353 RP1L1Q8IWN7 2480 aaPredicted RBP4.33□□□□□ -1.72
CPS1-205ENST00000467353 IGHV5-10-1A0A0J9YXX1 117 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 FAM221AA4D161 298 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 IGLON5A6NGN9 336 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 PRSS44E7EML9 344 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 C1QTNF3-AMACRE9PGA6 284 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 J3QL48 77 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 KPNA3O00505 521 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 FPGTO14772 594 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 IRAK2O43187 625 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 BNIP3LO60238 219 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ACSL4O60488 711 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 RFPL1O75677 317 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 GCNT3O95395 438 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 LATS1O95835 1130 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 IGLV3-27P01718 113 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 MYCLP1P12525 358 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 GLB1P16278 677 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 MAP4P27816 1152 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 HOXD13P35453 343 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 NNMTP40261 264 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 SLC11A2P49281 568 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 COPB1P53618 953 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 PMS2P54278 862 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 EPHB1P54762 984 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 TBX4P57082 545 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 MC1RQ01726 317 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 SRSF11Q05519 484 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 CDH18Q13634 790 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ERV3-1Q14264 604 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 PSMD6Q15008 389 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ZRSR2Q15696 482 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 DLG2Q15700 870 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 SPRED3Q2MJR0 410 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 AMZ1Q400G9 498 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ACCSLQ4AC99 568 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 DCAF6Q58WW2 860 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ZRANB3Q5FWF4 1079 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ZNF667Q5HYK9 610 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 CERCAMQ5T4B2 595 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 BSPRYQ5W0U4 402 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ANKS6Q68DC2 871 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 PM20D1Q6GTS8 502 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 JMJD6Q6NYC1 403 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 LINGO4Q6UY18 593 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ERN2Q76MJ5 926 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 PIM3Q86V86 326 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 UNC93AQ86WB7 457 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 ARHGAP18Q8N392 663 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 HJURPQ8NCD3 748 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 GPR156Q8NFN8 814 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 FBXO18Q8NFZ0 1043 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 FBXO27Q8NI29 283 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 NINJ1Q92982 152 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 CENPTQ96BT3 561 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 FEM1CQ96JP0 617 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 C8orf76Q96K31 380 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 TBATAQ96M53 351 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 LENG8Q96PV6 779 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 CTRCQ99895 268 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 NUDT22Q9BRQ3 303 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 DUSP16Q9BY84 665 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 IRX2Q9BZI1 471 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 ZCCHC2Q9C0B9 1178 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 INTS2Q9H0H0 1204 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 MLXIPLQ9NP71 852 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 MRPL40Q9NQ50 206 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 OCIAD1Q9NX40 245 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 AKAP7Q9P0M2 348 aaPredicted RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 LRIT1Q9P2V4 623 aa4.32□□□□□ -1.72
CPS1-205ENST00000467353 NOL7Q9UMY1 257 aaKnown RBP4.32□□□□□ -1.72
CPS1-205ENST00000467353 MN1Q10571 1320 aaPredicted RBP4.31□□□□□ -1.72
CPS1-205ENST00000467353 HEATR9A2RTY3 570 aa4.31□□□□□ -1.72
CPS1-205ENST00000467353 ANKUB1A6NFN9 424 aa4.31□□□□□ -1.72
CPS1-205ENST00000467353 YJEFN3A6XGL0 299 aa4.31□□□□□ -1.72
CPS1-205ENST00000467353 B4E171 279 aa4.31□□□□□ -1.72
CPS1-205ENST00000467353 E7ENQ6 273 aa4.31□□□□□ -1.72
CPS1-205ENST00000467353 TULP2O00295 520 aa4.31□□□□□ -1.72
CPS1-205ENST00000467353 HGSO14964 777 aaPredicted RBP4.31□□□□□ -1.72
CPS1-205ENST00000467353 ALOX15BO15296 676 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms