RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 TRAF2Q12933 501 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 MSLNQ13421 630 aaPredicted RBP12.26□□□□□ -0.45
LAMP3-202ENST00000466939 SLC12A1Q13621 1099 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 RAB30Q15771 203 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 PLEKHG6Q3KR16 790 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 PITRM1Q5JRX3 1037 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 ATXN7L2Q5T6C5 722 aaPredicted RBP12.26□□□□□ -0.45
LAMP3-202ENST00000466939 FSTL4Q6MZW2 842 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 NCEH1Q6PIU2 408 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 CDHR3Q6ZTQ4 885 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 FAM47EQ6ZV65 393 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 CMC1Q7Z7K0 106 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 SRLQ86TD4 932 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 DENND6AQ8IWF6 608 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 PAF1Q8N7H5 531 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 C12orf76Q8N812 135 aaPredicted RBP12.26□□□□□ -0.45
LAMP3-202ENST00000466939 CCDC63Q8NA47 563 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 OR6P1Q8NGX9 317 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 RIN3Q8TB24 985 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 PDCD6IPQ8WUM4 868 aaKnown RBP12.26□□□□□ -0.45
LAMP3-202ENST00000466939 ACDQ96AP0 544 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 SEC16BQ96JE7 1060 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 CABS1Q96KC9 395 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 ELAC2Q9BQ52 826 aaKnown RBP12.26□□□□□ -0.45
LAMP3-202ENST00000466939 BBS2Q9BXC9 721 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 ADGRE3Q9BY15 652 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 RHOJQ9H4E5 214 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 SFXN1Q9H9B4 322 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 SLC39A10Q9ULF5 831 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 PLLPQ9Y342 182 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 KCTD3Q9Y597 815 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 PCDHGC4Q9Y5F7 938 aa12.26□□□□□ -0.45
LAMP3-202ENST00000466939 MROH6A6NGR9 719 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 K7ERQ8 282 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 SLC9A3R1O14745 358 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 LDB2O43679 373 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 SIN3BO75182 1162 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 CRTAMO95727 393 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 PENKP01210 267 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 MPOP05164 745 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 SAT1P21673 171 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 HADHAP40939 763 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ETV4P43268 484 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 CD151P48509 253 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 AP1S1P61966 158 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 NSUN2Q08J23 767 aaKnown RBP eCLIP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 SF3A3Q12874 501 aaKnown RBP eCLIP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 CTBP1Q13363 440 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 PDE1CQ14123 709 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 GRM3Q14832 879 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 RNF43Q68DV7 783 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 TMC5Q6UXY8 1006 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 METTL3Q86U44 580 aaKnown RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ZC3HC1Q86WB0 502 aaKnown RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 TMEM25Q86YD3 366 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ARID3BQ8IVW6 561 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 TRIM42Q8IWZ5 723 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 EFHBQ8N7U6 833 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ZNF557Q8N988 423 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 CCDC197Q8NCU1 140 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 C2CD4AQ8NCU7 369 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 OR13J1Q8NGT2 312 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ITFG1Q8TB96 612 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 BRSK1Q8TDC3 778 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ZNF75CPQ92670 426 aaPredicted RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 DNAJC1Q96KC8 554 aaKnown RBP12.25□□□□□ -0.45
LAMP3-202ENST00000466939 NSMCE3Q96MG7 304 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ZSWIM3Q96MP5 696 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 PBX4Q9BYU1 374 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 TM6SF2Q9BZW4 377 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 CAB39LQ9H9S4 337 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 FBXO5Q9UKT4 447 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 ARL5AQ9Y689 179 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 WNT6Q9Y6F9 365 aa12.25□□□□□ -0.45
LAMP3-202ENST00000466939 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 CCL22O00626 93 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 SLC7A4O43246 635 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 BUD23O43709 281 aaKnown RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 IGSF6O95976 241 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 MT-CO1P00395 513 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 SLC4A1P02730 911 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 DHRS4L1P0CG22 281 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 TCF3P15923 654 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 MAGEA12P43365 314 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 MAPK8P45983 427 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 PLK1P53350 603 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 EPHB1P54762 984 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 HNRNPH2P55795 449 aaKnown RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 USP10Q14694 798 aaKnown RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 CBX2Q14781 532 aaPredicted RBP12.24□□□□□ -0.45
LAMP3-202ENST00000466939 FUT11Q495W5 492 aa12.24□□□□□ -0.45
LAMP3-202ENST00000466939 TAF1BQ53T94 588 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms