RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-223	ENST00000452489	CRHBP	P24387	322 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	NAGLU	P54802	743 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	IMPG1	Q17R60	797 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	STEAP3	Q658P3	488 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	TBPL2	Q6SJ96	375 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	TEKT3	Q9BXF9	490 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	RUBCNL	Q9H714	662 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	TLR9	Q9NR96	1032 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	MRAS	O14807	208 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	UPK1B	O75841	260 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	KRT6A	P02538	564 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	KRT6B	P04259	564 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	IL10	P22301	178 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	CD68	P34810	354 aa	Predicted RBP	18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	PGGT1B	P53609	377 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	GP2	P55259	537 aa	Known RBP	18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	BST2	Q10589	180 aa	Known RBP	18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	STX5	Q13190	355 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	PUS10	Q3MIT2	529 aa	Known RBP	18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	IRAK1BP1	Q5VVH5	260 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	SLC22A15	Q8IZD6	547 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	CELF2-AS1	Q8N7Q2	184 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	ZNF280C	Q8ND82	737 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	SLC22A17	Q8WUG5	538 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	LRCH3	Q96II8	777 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	DEPDC7	Q96QD5	511 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	BTBD2	Q9BX70	525 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	WDR11	Q9BZH6	1224 aa		18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	DDX4	Q9NQI0	724 aa	Known RBP	18.79	■□□□□ 0.6
PTPA-223	ENST00000452489	SRP72	O76094	671 aa	Known RBP	18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	FKBP9	O95302	570 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	HOXD10	P28358	340 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	LRPAP1	P30533	357 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	NPTX2	P47972	431 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	PPP5C	P53041	499 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SOX10	P56693	466 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	VBP1	P61758	197 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SELPLG	Q14242	412 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SH3PXD2A	Q5TCZ1	1133 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	LSMEM2	Q8N112	164 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	GLMN	Q92990	594 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	RTP4	Q96DX8	246 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SLC10A4	Q96EP9	437 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	NMRAL1	Q9HBL8	299 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	USP18	Q9UMW8	372 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	FIS1	Q9Y3D6	152 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489		A0A096LPK6	155 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	CCDC78	A2IDD5	438 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489		A8MV72	311 aa	Predicted RBP	18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	DAB1	O75553	588 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SEC24A	O95486	1093 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	PSMA4	P25789	261 aa	Known RBP	18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	ACOT2	P49753	483 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SESN2	P58004	480 aa	Predicted RBP	18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	GPLD1	P80108	840 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	PRKAA1	Q13131	559 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	FASTK	Q14296	549 aa	Known RBP	18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	PPP1R3A	Q16821	1122 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	BSPRY	Q5W0U4	402 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	STEAP4	Q687X5	459 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	B3GNT9	Q6UX72	402 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	OR6F1	Q8NGZ6	308 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	ZFYVE19	Q96K21	471 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SNX18	Q96RF0	628 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	KCNN3	Q9UGI6	736 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	SMCHD1	A6NHR9	2005 aa		18.78	■□□□□ 0.6
PTPA-223	ENST00000452489	HNRNPDL	O14979	420 aa	Known RBP	18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	USP12	O75317	370 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	TRUB2	O95900	331 aa	Known RBP	18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	C7	P10643	843 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	TNFAIP2	Q03169	654 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	C19orf57	Q0VDD7	668 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	DGUOK	Q16854	277 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	PTPN20	Q4JDL3	420 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	PAGE2	Q7Z2X7	111 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	LACC1	Q8IV20	430 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	PLD5	Q8N7P1	536 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	DTX3	Q8N9I9	347 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	PIK3C3	Q8NEB9	887 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	FAM83F	Q8NEG4	500 aa	Predicted RBP	18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	OR9I1	Q8NGQ6	314 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	MUL1	Q969V5	352 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	SLC45A3	Q96JT2	553 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	DMRTB1	Q96MA1	342 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	ZNF717	Q9BY31	904 aa	Predicted RBP	18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	IL1RL2	Q9HB29	575 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	LTB4R2	Q9NPC1	389 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	CAB39	Q9Y376	341 aa	Predicted RBP	18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	SDHD	O14521	159 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	HMGCR	P04035	888 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	ATP2B4	P23634	1241 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	GPD2	P43304	727 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	FAM214A	Q32MH5	1076 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	OTUD3	Q5T2D3	398 aa	Predicted RBP	18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	CCDC28A	Q8IWP9	274 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	GALNT12	Q8IXK2	581 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	ADGRG5	Q8IZF4	528 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	RHOXF1	Q8NHV9	184 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	CPB2	Q96IY4	423 aa		18.77	■□□□□ 0.6
PTPA-223	ENST00000452489	C12orf4	Q9NQ89	552 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms