RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CREB3L1Q96BA8 519 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 CPNE1Q99829 537 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 MUC13Q9H3R2 512 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 KCNK4Q9NYG8 393 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 CLIC5Q9NZA1 410 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHGA11Q9Y5H2 935 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 ACTL7BQ9Y614 415 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 AP5Z1O43299 807 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 FCER1AP12319 257 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 PAMR1Q6UXH9 720 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 ARHGAP27Q6ZUM4 889 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 CHCHD4Q8N4Q1 142 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 TERB2Q8NHR7 220 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 OXNAD1Q96HP4 312 aaPredicted RBP8.99□□□□□ -0.97
NIPBL-202ENST00000448238 STARD7Q9NQZ5 370 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 FBXO10Q9UK96 956 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 RPL26L1Q9UNX3 145 aaKnown RBP8.99□□□□□ -0.97
NIPBL-202ENST00000448238 AP4E1Q9UPM8 1137 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 DGKBQ9Y6T7 804 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 RTTNQ86VV8 2226 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 PTPN23Q9H3S7 1636 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 A0A0D9SFI3 127 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 QSOX1O00391 747 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 PLD2O14939 933 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 PGLSO95336 258 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 GALCP54803 685 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 FASTKD3Q14CZ7 662 aaKnown RBP8.99□□□□□ -0.97
NIPBL-202ENST00000448238 MGAT5BQ3V5L5 792 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 ZNF283Q8N7M2 679 aa8.99□□□□□ -0.97
NIPBL-202ENST00000448238 LEF1Q9UJU2 399 aaPredicted RBP8.99□□□□□ -0.97
NIPBL-202ENST00000448238 PIN4Q9Y237 131 aaKnown RBP8.99□□□□□ -0.97
NIPBL-202ENST00000448238 TRMUO75648 421 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ANXA3P12429 323 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SLC5A9Q2M3M2 681 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 AUTS2Q8WXX7 1259 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ANKRA2Q9H9E1 313 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 RAD51CO43502 376 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CST1P01037 141 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 POLR2HP52434 150 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PHC1P78364 1004 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SPIBQ01892 262 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PTPAQ15257 358 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ASTE1Q2TB18 679 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SETD6Q8TBK2 473 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SSX3Q99909 188 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SLC22A4Q9H015 551 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MAB21L2Q9Y586 359 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ABCB11O95342 1321 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 RP2O75695 350 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 GRIA3P42263 894 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CRISP1P54107 249 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 RPL6Q02878 288 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 C1QBPQ07021 282 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ZC3HC1Q86WB0 502 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 GPSM1Q86YR5 675 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SNX33Q8WV41 574 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 NSMCE3Q96MG7 304 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 RBM4BQ9BQ04 359 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 RBM4Q9BWF3 364 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 IDI2Q9BXS1 227 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 COG5Q9UP83 839 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ITSN2Q9NZM3 1697 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 HERC3Q15034 1050 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SLC9B1Q4ZJI4 515 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 C3orf33Q6P1S2 294 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 TBC1D21Q8IYX1 336 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 OXR1Q8N573 874 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MRPS31Q92665 395 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PRCCQ92733 491 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 TREX2Q9BQ50 279 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 LXNQ9BS40 222 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MKNK1Q9BUB5 465 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 JPH1Q9HDC5 661 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 IKZF2Q9UKS7 526 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 HCN1O60741 890 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 AP2A2O94973 939 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 LATS1O95835 1130 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 EPORP19235 508 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 RPS9P46781 194 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ZMYM1Q5SVZ6 1142 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ILDR2Q71H61 639 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 REEP2Q9BRK0 252 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 FAM126AQ9BYI3 521 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHB16Q9NRJ7 776 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 THG1LQ9NWX6 298 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHA6Q9UN73 950 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHA8Q9Y5H6 950 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 SDK1Q7Z5N4 2213 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 WASHC1A8K0Z3 465 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 WASH3PC4AMC7 463 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 PITPNM1O00562 1244 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 E2F3O00716 465 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 CLN5O75503 358 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 IRF1P10914 325 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 AKT2P31751 481 aa8.98□□□□□ -0.97
NIPBL-202ENST00000448238 ALDH7A1P49419 539 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 TXNL4AP83876 142 aaKnown RBP8.98□□□□□ -0.97
NIPBL-202ENST00000448238 MAB21L1Q13394 359 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms