RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GEN1Q17RS7 908 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 ZKSCAN2Q63HK3 967 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 HMBOX1Q6NT76 420 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 MAEAQ7L5Y9 396 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 SPRED1Q7Z699 444 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 CEP97Q8IW35 865 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 WFDC11Q8NEX6 87 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PHOSPHO1Q8TCT1 267 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 SPPL2BQ8TCT7 592 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 NINJ1Q92982 152 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 DRC1Q96MC2 740 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 XPO6Q96QU8 1125 aaKnown RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 GFM1Q96RP9 751 aaKnown RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 ADPGKQ9BRR6 497 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 PLA2G12AQ9BZM1 189 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 INTS2Q9H0H0 1204 aaKnown RBP5.17□□□□□ -1.58
SDCBP-205ENST00000447267 TMEM168Q9H0V1 697 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 CDH19Q9H159 772 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 MTG2Q9H4K7 406 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 L2HGDHQ9H9P8 463 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 KLHL11Q9NVR0 708 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 FBXL12Q9NXK8 326 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 MEGF8Q7Z7M0 2845 aa5.17□□□□□ -1.58
SDCBP-205ENST00000447267 A0A087WWV3 80 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 A0A1W2PQM1 296 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SMCO2A6NFE2 343 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 D6RAR5 112 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 ACOT7O00154 380 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 IFIT3O14879 490 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 AKAP8O43823 692 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 CACNG3O60359 315 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PSMD10O75832 226 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 KNG1P01042 644 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 CYP1A1P04798 512 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PABPC1P11940 636 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 TYMPP19971 482 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PROZP22891 400 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PGDP52209 483 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF132P52740 706 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 NAPAP54920 295 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SETQ01105 290 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PTK2BQ14289 1009 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 STAT4Q14765 748 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 CCDC142Q17RM4 750 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 BMT2Q1RMZ1 405 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 ZCCHC8Q6NZY4 707 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 TRMT10BQ6PF06 316 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SERPINA13PQ6UXR4 307 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 RAB11FIP4Q86YS3 637 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SCN4BQ8IWT1 228 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 KBTBD2Q8IY47 623 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 EXOC8Q8IYI6 725 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 Q8N1X5 172 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SDR16C5Q8N3Y7 309 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 UHMK1Q8TAS1 419 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 STARD8Q92502 1023 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SLC5A5Q92911 643 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PTPRN2Q92932 1015 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SENP8Q96LD8 212 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 RIT2Q99578 217 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 KCNJ15Q99712 375 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 MYOCQ99972 504 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 AARSD1Q9BTE6 412 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 POLR3FQ9H1D9 316 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 MRPL40Q9NQ50 206 aaKnown RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PRSS16Q9NQE7 514 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 PRMT7Q9NVM4 692 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.16□□□□□ -1.58
SDCBP-205ENST00000447267 NCKAP1Q9Y2A7 1128 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 BIRC6Q9NR09 4857 aa5.16□□□□□ -1.58
SDCBP-205ENST00000447267 NSD1Q96L73 2696 aaPredicted RBP5.15□□□□□ -1.58
SDCBP-205ENST00000447267 TRIP11Q15643 1979 aa5.15□□□□□ -1.58
SDCBP-205ENST00000447267 CKAP5Q14008 2032 aa5.15□□□□□ -1.58
SDCBP-205ENST00000447267 ZNF840PA6NDX5 716 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 NEMP2A6NFY4 417 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 SERINC4A6NH21 518 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 TMX2-CTNND1H3BSU7 103 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 MSI1O43347 362 aaKnown RBP5.15□□□□□ -1.59
SDCBP-205ENST00000447267 IL18BPO95998 194 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 RPLP0P05388 317 aaKnown RBP5.15□□□□□ -1.59
SDCBP-205ENST00000447267 KCNE1P15382 129 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 RXRAP19793 462 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 GRK2P25098 689 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 CCKBRP32239 447 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 GRK3P35626 688 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 AARSP49588 968 aaKnown RBP eCLIP5.15□□□□□ -1.59
SDCBP-205ENST00000447267 CCR5P51681 352 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 PPP2R2BQ00005 443 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 Q0VFX4 171 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 CHAF1BQ13112 559 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 GNL2Q13823 731 aaKnown RBP5.15□□□□□ -1.59
SDCBP-205ENST00000447267 C16orf72Q14CZ0 275 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 FAM187BQ17R55 369 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 ARHGAP44Q17R89 818 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 DUS1LQ6P1R4 473 aaKnown RBP5.15□□□□□ -1.59
SDCBP-205ENST00000447267 BHLHB9Q6PI77 547 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 MRGPRGQ86SM5 289 aa5.15□□□□□ -1.59
SDCBP-205ENST00000447267 SLC35F3Q8IY50 421 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms