RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ANGPTL8Q6UXH0 198 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 OTOAQ7RTW8 1153 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SETD3Q86TU7 594 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TEX9Q8N6V9 391 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ARL14EPQ8N8R7 260 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 GPR62Q9BZJ7 368 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC25A51Q9H1U9 297 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 CXCL16Q9H2A7 254 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 LRMDAQ9H2I8 198 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 RHOJQ9H4E5 214 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 BPIFA1Q9NP55 256 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PNPLA8Q9NP80 782 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 GKN1Q9NS71 199 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 CFAP97Q9P2B7 532 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PEX1O43933 1283 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 LZTS3O60299 673 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 RPS24P62847 133 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 C16orf87Q6PH81 154 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 LINGO4Q6UY18 593 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC22A9Q8IVM8 553 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 MPP5Q8N3R9 675 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 FAR2Q96K12 515 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 OMDQ99983 421 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 APPL1Q9UKG1 709 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 KRT36O76013 467 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLEKHG4Q58EX7 1191 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 UBR7Q8N806 425 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 C2orf15Q8WU43 125 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 C8orf48Q96LL4 319 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 SMOC2Q9H3U7 446 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 MRGBPQ9NV56 204 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 KPNA3O00505 521 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 MGEA5O60502 916 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZMPSTE24O75844 475 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 ITGB1P05556 798 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 GALTP07902 379 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 HOXB8P17481 243 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 CHRNA4P43681 627 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 HCAR3P49019 387 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 CLCN5P51795 746 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 RAB10P61026 200 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLIN5Q00G26 463 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 KCNJ11Q14654 390 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 KHDC1Q4VXA5 237 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 ESRP1Q6NXG1 681 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 FBXL22Q6P050 247 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 PCYOX1LQ8NBM8 494 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 EME1Q96AY2 570 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 PRR11Q96HE9 360 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 HHIPL1Q96JK4 782 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 BBS2Q9BXC9 721 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 ALG9Q9H6U8 611 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLLPQ9Y342 182 aa11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZFP37Q9Y6Q3 630 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-202ENST00000438773 A0A1B0GVM2 712 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 MTMR11A4FU01 709 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 TCAF2A6NFQ2 919 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 A6NHS1 94 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM72CH0Y354 149 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 CLTBP09497 229 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 PTPRNQ16849 979 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM72AQ5TYM5 149 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM72DQ6L9T8 149 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM72BQ86X60 149 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 FBXO39Q8N4B4 442 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF333Q96JL9 665 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 RIC8BQ9NVN3 520 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 SCML2Q9UQR0 700 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 CPQQ9Y646 472 aa11.65□□□□□ -0.55
TRAPPC9-202ENST00000438773 CCL22O00626 93 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 CTPS1P17812 591 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 PTPN4P29074 926 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 NDST2P52849 883 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAPK10P53779 464 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 RNF220Q5VTB9 566 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 UTS2BQ765I0 119 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 SNX31Q8N9S9 440 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 GRIN3AQ8TCU5 1115 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 PYDC1Q8WXC3 89 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 NCLNQ969V3 563 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 POMKQ9H5K3 350 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 DCLRE1BQ9H816 532 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 EIF2B3Q9NR50 452 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 BTN3A1O00481 513 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 DCXO43602 365 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 TCEA3O75764 348 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 LTA4HP09960 611 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 THRAP10827 490 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 TFEBP19484 476 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 LPOP22079 712 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 NMBRP28336 390 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms