RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 IPO11Q9UI26 975 aaKnown RBP12.65□□□□□ -0.38
SMPD4-204ENST00000430682 IGSF10Q6WRI0 2623 aa12.65□□□□□ -0.38
SMPD4-204ENST00000430682 LY6G6EA0A0G2JKS1 128 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 SPTY2D1-AS1A0A0U1RR47 76 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 A6NNZ2 444 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 YKT6O15498 198 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 MAGEC1O60732 1142 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 PIAS2O75928 621 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 NEBLO76041 1014 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 DESP17661 470 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 PTMSP20962 102 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 PFN3P60673 137 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 IL10RBQ08334 325 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 EIF2B5Q13144 721 aaKnown RBP12.64□□□□□ -0.39
SMPD4-204ENST00000430682 PIGHQ14442 188 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-204ENST00000430682 IHHQ14623 411 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 ACAP1Q15027 740 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 TMEM52BQ4KMG9 183 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
SMPD4-204ENST00000430682 VPS36Q86VN1 386 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 VSTM4Q8IW00 320 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 OXR1Q8N573 874 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 TP53I13Q8NBR0 393 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-204ENST00000430682 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 ASB12Q8WXK4 309 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 PCDH12Q9NPG4 1184 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 IP6K2Q9UHH9 426 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 RALYQ9UKM9 306 aaKnown RBP12.64□□□□□ -0.39
SMPD4-204ENST00000430682 U3KQA8 63 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 ADAMTS20P59510 1910 aa12.64□□□□□ -0.39
SMPD4-204ENST00000430682 H3BRJ5 948 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 NEMP1O14524 444 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
SMPD4-204ENST00000430682 FFAR2O15552 330 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 MAFKO60675 156 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 PALMO75781 387 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 GM2AP17900 193 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 CSNK1DP48730 415 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 ADKP55263 362 aaKnown RBP12.63□□□□□ -0.39
SMPD4-204ENST00000430682 RALGDSQ12967 914 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 SGCGQ13326 291 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 PTPRRQ15256 657 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
SMPD4-204ENST00000430682 UGP2Q16851 508 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 FAM182AQ5T1J6 154 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 KCTD16Q68DU8 428 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 RBFAQ8N0V3 343 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 ZNF564Q8TBZ8 553 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-204ENST00000430682 MDM1Q8TC05 714 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 LRRN4Q8WUT4 740 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 TEKT4Q8WW24 435 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 ZCCHC14Q8WYQ9 949 aaKnown RBP12.63□□□□□ -0.39
SMPD4-204ENST00000430682 ECHDC3Q96DC8 303 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 IQCDQ96DY2 449 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 TSPY26PQ9H489 355 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 SP110Q9HB58 689 aa12.63□□□□□ -0.39
SMPD4-204ENST00000430682 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMPD4-204ENST00000430682 ZFC3H1O60293 1989 aaKnown RBP12.62□□□□□ -0.39
SMPD4-204ENST00000430682 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-204ENST00000430682 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-204ENST00000430682 FPGTO14772 594 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 CASC3O15234 703 aaKnown RBP12.62□□□□□ -0.39
SMPD4-204ENST00000430682 TM7SF2O76062 418 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 MAP3K6O95382 1288 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 CR2P20023 1033 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 GJC1P36383 396 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 MMP12P39900 470 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 LIG3P49916 1009 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 CDH6P55285 790 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 RAD51Q06609 339 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 PDE1CQ14123 709 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-204ENST00000430682 LBRQ14739 615 aaKnown RBP12.62□□□□□ -0.39
SMPD4-204ENST00000430682 IRF4Q15306 451 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 SLC18A3Q16572 532 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 WSCD2Q2TBF2 565 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 INAVAQ3KP66 663 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 SPECC1LQ69YQ0 1117 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 PELI3Q8N2H9 469 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 DENND6BQ8NEG7 585 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 OR8K1Q8NGG5 319 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 OR4C6Q8NH72 309 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 PCDH19Q8TAB3 1148 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 SMIM14Q96QK8 99 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 PSKH2Q96QS6 385 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 SPTLC3Q9NUV7 552 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 DNAJC28Q9NX36 388 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 MGAQ8IWI9 3026 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 UNC13CQ8NB66 2214 aa12.62□□□□□ -0.39
SMPD4-204ENST00000430682 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 A8MX80 341 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 MYO1FO00160 1098 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 MFSD11O43934 449 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 GCATO75600 419 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 RFPL3O75679 317 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 PROSCO94903 275 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 CSF2P04141 144 aa12.61□□□□□ -0.39
SMPD4-204ENST00000430682 C6P13671 934 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms